Protein Alignment Pabp2 and T08B6.1

DIOPT Version :9

• Sequence 1: NP_476902.1
• Gene: Pabp2 / 35788
• FlyBaseID: FBgn0005648
• Length: 224
• Species: Drosophila melanogaster
• Sequence 2: NP_500665.2
• Gene: T08B6.1 / 188275
• WormBaseID: WBGene00020351
• Length: 96
• Species: Caenorhabditis elegans
• Alignment Length: 83
• Identity: 23/83 - (27%)
• Similarity: 35/83 - (42%)
• Gaps: 23/83 - (27%)

  Fly   152 TALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRGARVSRACCHSTFRGARRA----- 211
            :||.::...||.|::.|.:||||:||...|.             .||:.||:..|..:|.
 Worm    27 SALVLSGFKFRNRKVTVTTKRTNKPGFGKTT-------------ASRSQCHAKPRPGQRVTIVKY 78

  Fly   212 MGYRGRANYY-----APY 224
            :......|.:     |||
 Worm    79 VNVNATVNVFKSKRSAPY 96

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pabp2	NP_476902.1	RRM	<43..>172	CDD:223796	6/19 (32%)
		RRM_II_PABPN1	97..172	CDD:240994	6/19 (32%)
T08B6.1	NP_500665.2	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4209
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001228
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.810