Protein Alignment Pbp49 and snpc-3.1

DIOPT Version :10

• Sequence 1: NP_610357.1
• Gene: Pbp49 / 35787
• FlyBaseID: FBgn0260398
• Length: 377
• Species: Drosophila melanogaster
• Sequence 2: NP_500819.1
• Gene: snpc-3.1 / 177331
• WormBaseID: WBGene00015098
• Length: 425
• Species: Caenorhabditis elegans
• Alignment Length: 317
• Identity: 83/317 - (26%)
• Similarity: 115/317 - (36%)
• Gaps: 73/317 - (23%)

  Fly    95 HKDKSRKCPFGRTQYSHKLNPT--------------------------PTDSPNLHIDACGELEL 133
            |:..:||.|       |.:.||                          ||....|::|. .|.:|
 Worm   122 HRALARKSP-------HLMPPTYIKEEIMDDELDEVKEEEVSVGEAALPTAKVELNMDH-PEKDL 178

  Fly   134 TVRL-----YRPPRAYH-----RGFKVEIPVFAEEFVCLGSNYLTELRDKISCVCNGKRFVDISD 188
            .:..     |.....||     |..||     .:.....|.:.|.:|::..||..:    ...||
 Worm   179 IISTSVYLGYTRTLQYHEIRLGRLMKV-----TDRLELTGDHTLRDLKNAFSCPID----FSFSD 234

  Fly   189 DPDAPLPSIDT------NPGYFFINDTFYNDQRNPDN-PDYSKTVLQWAARANGVNGETLKVESM 246
            |.....||...      ....|||:||||.|....|. .|.|.|:..||.:.:.:.  .:.|:.|
 Worm   235 DFSEKKPSFKDMAKNKWPSSMFFIHDTFYIDSNTGDQFVDPSITIRTWAKKFDYIG--PMHVKQM 297

  Fly   247 EGKRFIDLTVSPGSPLHYLHHGNCEHLFVISQVEVLTPLSKRPDRSL---YPYPHAFSTFNRRTC 308
            ...|..||....|.|..|:|.|.||||.|.:.      |..|.:...   :|.......|.|..|
 Worm   298 SETRIGDLICRLGQPYVYIHQGVCEHLIVFND------LCLRDESHTNVEFPRRLVERNFRRIAC 356

  Fly   309 YMCGIRS-YSFIVNQSRRQLHDPSYLCRRCFLSF-FYVDGVKLGQFKAYRMYDHVEL 363
            ..|...| :..||:......:.|.|||..|:..| |.|:|.|:.||||....|..::
 Worm   357 DTCKEASAHWMIVDHDNLLPNSPGYLCSSCYKEFCFDVNGNKVCQFKAVPYCDRKDI 413

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pbp49	NP_610357.1	SNAPC3	157..358	CDD:463506	63/212 (30%)
snpc-3.1	NP_500819.1	SNAPC3	207..408	CDD:463506	63/212 (30%)