DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lig and Ubap2l

DIOPT Version :10

Sequence 1:NP_001260795.1 Gene:lig / 35771 FlyBaseID:FBgn0020279 Length:1417 Species:Drosophila melanogaster
Sequence 2:NP_001159455.1 Gene:Ubap2l / 74383 MGIID:1921633 Length:1112 Species:Mus musculus


Alignment Length:1322 Identity:358/1322 - (27%)
Similarity:527/1322 - (39%) Gaps:335/1322 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 QDASKTDKPEKAQPKATTEQLRIAQITNSTTEDPQINEKVLLLLTMTQRSEEEVCCALNECDYDL 114
            |..::.....|.:|:||.||:|:||:. |...|....|||..|:.:|.::::|...||::|:.|:
Mouse    16 QPQNQNQTQHKQRPQATAEQIRLAQMI-SDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDV 79

  Fly   115 EAAANFLIEELPQGAFAKYEKKRKNKAANNTADGAAGDGDWADGNGNADRREKSRNRSSNRGGT- 178
            ..|.|.|:|..|.  ...:|...|.|..:...||...:.: .:|..|.||   .|:.|..|||. 
Mouse    80 NRAINVLLEGNPD--THSWEMVGKKKGVSGQKDGGQTESN-EEGKENRDR---DRDYSRRRGGPP 138

  Fly   179 ---RGSSDSRGWRGRETRENERNQRESREPWSGQNAGQDRGDDRANDNYRGQRNGGGRSGPGGGG 240
               ||:|..|.:||   :||..:..:|..| ||:  |.|||           |.|.|| |.|..|
Mouse   139 RRGRGASRGREFRG---QENGLDGTKSGGP-SGR--GTDRG-----------RRGRGR-GRGSSG 185

  Fly   241 RGGGFVSRSGRGGGRMGGRTGGPRGDRGSGGPGGAYGSGRGGNANEDHHEVELWDNTI------- 298
            |.||..|..|.|       |..|............||:..|...|...| .|..|.|.       
Mouse   186 RRGGRFSAQGMG-------TFNPADYAEPANTDDNYGNSSGNTWNNTGH-FEPDDGTRLDFIGVE 242

  Fly   299 -AQNAEKQQQA----HDDAW----GDWNNEEYEGSLKDSKVFTTSNLAT--QSAANVVSGTGASV 352
             :....|.:.|    |..||    .:|..|::...|.::|:||.||:::  ..|.||....|..:
Mouse   243 GSNYPRKFETAPGMIHPGAWRTATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRI 307

  Fly   353 TAVPAAAGTEISAPPGLEHQLVQQGSHLEES-----------SSSGPAAVTPPATLSGSATTPLL 406
            ........|    |..:|:    ..|:|:.|           |:|...|::.||  |||.    .
Mouse   308 DLAVLLGKT----PSSMEN----DSSNLDPSQAPSLAQPLVFSNSKQNAISQPA--SGST----F 358

  Fly   407 QYSAAVSNPPPQLQSQGTQSGAGTGASAAAGGGAGSTPSSFVSASPDTFSSAASAAATLVHQAQK 471
            .:.:.||           ..|.|.|....|.||: :|.|.|:    :.|.:|.:    |...|.:
Mouse   359 SHHSMVS-----------MLGKGFGDVGEAKGGS-TTGSQFL----EQFKTAQA----LAQLAAQ 403

  Fly   472 QQQLQQQTTPI--KPSATLSVEQSQYFNSLAS-----------QGVSPGS----VPVQSAPAGYA 519
            ..|....||..  ..|.|.|....||....|:           |..:|.|    |.:|..|    
Mouse   404 HSQSGSTTTSSWDMGSTTQSPSLVQYDLKSANDSTVHSPFTKRQAFTPSSTMMEVFLQEKP---- 464

  Fly   520 QNPVAAYSQTSTSVGVSQYP--NTYANVFASGTAAGAGTAEQSQQQPQIRRARVKLPPPSKIPAS 582
              |..|.|..:.....|..|  :|.|...:.|::....::.|..|| ::::.:.|....|||||.
Mouse   465 --PAVATSTAAPPPPSSPLPSKSTSAPQMSPGSSDNQSSSPQPAQQ-KLKQQKKKTSLTSKIPAL 526

  Fly   583 AVEMPGDNALNNIGYLDVQFGALDFGTDDGFEPLPEKVGSGFSIDGQQQQQQPDDYQSKSQQQQQ 647
            ||||||.   .:|..|::|||||.||:    ||:                  ..||:|       
Mouse   527 AVEMPGS---ADISGLNLQFGALQFGS----EPV------------------LSDYES------- 559

  Fly   648 VTLAAGLQSSQISDALNAAGYTSRSTSQQQQGVSSAVNATIDQLTKSDPYGQTGGSGNAYQNAYQ 712
             |......|||...:|    |||.::..     ||.|:                 |..:.::.||
Mouse   560 -TPTTSASSSQAPSSL----YTSTASES-----SSTVS-----------------SNQSQESGYQ 597

  Fly   713 SSGASKTASGFPTTAPGGYSSSTYANVQSSVANSYQQQGYGSYQPSSYQQQAGSGAQSGTGAVSG 777
            |               |...|:||.:..::....|:|:   |.|...|.....|..|...     
Mouse   598 S---------------GPIQSTTYTSQNNAQGPLYEQR---STQTRRYPSSISSSPQKDL----- 639

  Fly   778 GGGTATQNIPVGGSSSQNSTSVSTSSGVSSNSGSTGNGGVVSGQTGANQAAVSNNNSVSGSSSVS 842
               |..:|    |.||..:|.:.|:..|   .|:||:  .|..::.:..:..|.|.:|..:|.::
Mouse   640 ---TQAKN----GFSSVQATQLQTTQSV---EGATGS--AVKSESPSTSSIPSLNETVPAASLLT 692

  Fly   843 NVTAGVASGNVAGVGGGVSQSGVSSGVGVPG------GSASSVGVNVNNNSSSASSVGAATVAQT 901
              ||...|.         |.||:|....:|.      .||.|...|..::|:|:.....:|:..|
Mouse   693 --TANQHSS---------SLSGLSHTEEIPNTTTTQHSSALSTQQNTLSSSTSSGRTSTSTLLHT 746

  Fly   902 ATGTTAAVLASLTNKNTSSSNSSGSGGSAATTTGNASGQGAGASTGGVGSSSGAGGAGSGGGSGS 966
            :..:.|.:.:|.:..:|:||..|......:.::...||...|.|.|  .:|:......|...:.|
Mouse   747 SVESEANLHSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLG--SNSTVTASTRSSVATTS 809

  Fly   967 GLVPTNIQ------MVSQYIQT-GLPY-YQQPVYSYEELQMMQQRVPHVQGYYDLNYP-PASLGA 1022
            |..|.|:.      :.:.||.. ||.: |...||.|::|||:|.|.|  ..||.:.:| |.:...
Mouse   810 GKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFP--LDYYSIPFPTPTTPLT 872

  Fly  1023 GRD-NLGSVTYSAMNDGRFARTDNNSSPVGNVSSTMSQQAGSSA----------PMLNVPYAY-- 1074
            ||| :|.|..||. :..:|.|.| .|||....:....||..:..          |.|...|:|  
Mouse   873 GRDGSLASNPYSG-DLTKFGRGD-ASSPAPATTLAQPQQNQTQTHHTTQQTFLNPALPPGYSYTS 935

  Fly  1075 --FYGG-NVMPGSFQYGTPAIYPQIPAAN---------TASGQQFPKPSYSAGYGSTSYDTLSQT 1127
              :|.| ..:|.:|||| ||::|..|.::         .||...|.:||   ||||..|:|    
Mouse   936 LPYYTGVPGLPSTFQYG-PAVFPVAPTSSKQHGVNVSVNASATPFQQPS---GYGSHGYNT---- 992

  Fly  1128 TQDYSKGGYSSSVNQQSKTQTVSNQSQAGTG-SDLTSSMYGKGHVALNKVNSYEKQSFHSGTP-P 1190
                   |.|         .|.||     || .|::.|:|.|..      .|:|||.|||||| .
Mouse   993 -------GVS---------VTSSN-----TGVPDISGSVYSKTQ------QSFEKQGFHSGTPAA 1030

  Fly  1191 PFNMPNTQTAGG-----TSAQPYGMYLPMP--------AAGHHNMIHQPIHQDSNS-AGQRQQST 1241
            .||:|:...:||     |:|    .|.|.|        ...|..::|..:.||..: :|||.|::
Mouse  1031 SFNLPSALGSGGPINPATAA----AYPPAPFMHILTPHQQPHSQILHHHLQQDGQTGSGQRSQTS 1091

  Fly  1242 S--QSKSAGKQGYSPSYWAGQN 1261
            |  |.....|..|:...| |.|
Mouse  1092 SIPQKPQTNKSAYNSYSW-GAN 1112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ligNP_001260795.1 PRK12678 16..>229 CDD:237171 57/182 (31%)
UBA_UBP2_like 85..122 CDD:270463 12/36 (33%)
DUF3697 575..607 CDD:372135 18/31 (58%)
Ubap2lNP_001159455.1 DUF3697 521..548 CDD:372135 18/29 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 555..681 41/194 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 694..819 32/135 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 890..926 8/36 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1065..1112 14/47 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 4/16 (25%)
UBA_UBP2_like 50..87 CDD:270463 12/36 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..229 50/168 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..518 11/52 (21%)

Return to query results.
Submit another query.