DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12769 and ztf-16

DIOPT Version :10

Sequence 1:NP_001286181.1 Gene:CG12769 / 35770 FlyBaseID:FBgn0033252 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_001024851.1 Gene:ztf-16 / 180756 WormBaseID:WBGene00019960 Length:480 Species:Caenorhabditis elegans


Alignment Length:695 Identity:146/695 - (21%)
Similarity:223/695 - (32%) Gaps:271/695 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 HHNAMALRSLKDAASSAS-------ESELQEPRS-----PTPTPTNLSTGPHSPPMTFRCERCDS 92
            |.|..:..|..:.::|.:       :|....|||     |||:|.:.....|...:|........
 Worm    27 HENEHSRSSSGEMSNSQTIEWGDGIQSSTPSPRSTPPSDPTPSPDSDEHLEHHISITEITNTLIK 91

  Fly    93 FETSSRASLLLHV------VQCLAGQAAAAAAAAAASARLKSEDLQEPENMSLGHMEG-GKGDGQ 150
            .|..::....:||      ..|:             |..:||            |:|. .:..||
 Worm    92 KEPGTKGQKTVHVCPHCNFTTCM-------------SQHMKS------------HLEAHERHQGQ 131

  Fly   151 TGNGSSSSASSSPAGNSGGGGGGNSSSRKVFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQ 215
                                         :::||:|.|:||..|||.||:|||:||||||||.|:
 Worm   132 -----------------------------MYQCDICKMQFSQKANMHRHRMRHSGVKPYECRFCK 167

  Fly   216 KRFFRKDHLAEHFTTHTKT-LPYHCPI--CNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRA 277
            |||||||.:.||..||.|| ..:.||:  ||..|.:..|:|||.:..|........:|..|:...
 Worm   168 KRFFRKDQMQEHSMTHIKTGFGFDCPVSQCNMQFSQHNALRAHLEETHTISSTNPASCKRCNLMF 232

  Fly   278 GSMKSLRIHFFNRHGIDLDNPGPGGTSSLLLALESQASAAAAAAAASYVPPGLSPVPVQSQSQQQ 342
            .:.:.|.:||..||.....:|....|..........|           :|...:.:.:..|.|:.
 Worm   233 ANSRRLLLHFQTRHDDSESSPKKENTPKRKKLSNGNA-----------LPMDPANMSITEQLQRM 286

  Fly   343 QQQQVAPPASDSGESMRSLENATPPMHFLTPHVEISTLGESGNTELFNLICVWRESALQGNNNNN 407
            .:.:.:||.:|:.::..|.|....|..|...:.:|.            |:|:             
 Worm   287 VKSEFSPPNTDTSDNSTSSEFDKIPPSFPMANPDIL------------LMCL------------- 326

  Fly   408 NNNNCATNNNNNINGASNNCNSISNGNAESNGDKVKDRALIMQSPVELPMDCNTKATPITSSTTA 472
                   |..|..||...|                          :..|| .|....|:.:.   
 Worm   327 -------NQMNQFNGFGEN--------------------------IPRPM-LNIPNIPLPAL--- 354

  Fly   473 SSLSGGLKSHHQHPHHHHHHHHHHENHITPSISLIPIKQEPMSEDMDKKDLMNGSDPSSDTEQAS 537
                                      |..|:::.| :||                    |..|..
 Worm   355 --------------------------HNIPAVAAI-VKQ--------------------DQVQLW 372

  Fly   538 NNNNSSSNNNRITSLIKVSPLKSLLREDLKRRICAKANNRITRNATPLESNNNNSVLSNSLSNGS 602
            :...|||        :.||.                        .:|.|.:::.....:|||...
 Worm   373 SEQTSSS--------VSVSA------------------------PSPSEQSHSPPANESSLSLTE 405

  Fly   603 GRGSPGVNGGSGGGGGGGPPTPATPSATNGASSTPICNGTITSTGQDGDLLINRKLILTCHFCGI 667
            ...|               |||......|                           :..|| ||:
 Worm   406 KEKS---------------PTPEKEDEEN---------------------------VECCH-CGM 427

  Fly   668 EFPDETLYFLHKGCHCESNPWRCNICGEQLNNVYEFNSHLLSKSH 712
            .|.|.|:|.|||..|.:.:|::|.:||.|....|.|.:|::...|
 Worm   428 MFYDNTMYLLHKSLHSDGDPFKCALCGTQCGEKYMFTTHVIFADH 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12769NP_001286181.1 C2H2 Zn finger 183..203 CDD:275368 12/19 (63%)
zf-H2C2_2 195..218 CDD:463886 17/22 (77%)
C2H2 Zn finger 211..231 CDD:275368 12/19 (63%)
C2H2 Zn finger 239..255 CDD:275368 7/17 (41%)
C2H2 Zn finger 662..689 CDD:275371 13/26 (50%)
C2H2 Zn finger 690..712 CDD:275371 7/21 (33%)
ztf-16NP_001024851.1 C2H2 Zn finger 105..125 CDD:275368 6/44 (14%)
C2H2 Zn finger 135..155 CDD:275368 12/19 (63%)
C2H2 Zn finger 163..183 CDD:275368 12/19 (63%)
C2H2 Zn finger 225..246 CDD:275368 5/20 (25%)

Return to query results.
Submit another query.