DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odc1 and odc1

DIOPT Version :10

Sequence 1:NP_477052.2 Gene:Odc1 / 35766 FlyBaseID:FBgn0013307 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001005441.1 Gene:odc1 / 448028 XenbaseID:XB-GENE-478945 Length:460 Species:Xenopus tropicalis


Alignment Length:417 Identity:185/417 - (44%)
Similarity:248/417 - (59%) Gaps:50/417 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EIQFYERELNIRRVIE----ECDLQRLDQALNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDDP 67
            :..|.|.....|.::|    |..|.....|..:.||..:.:|...|.|.|||:.|||||||||..
 Frog    10 DFSFLEEGFCARDIVEQKINEVSLSDDKDAFYVADLGDIVKKHVRWFKALPRVTPFYAVKCNDSK 74

  Fly    68 MVVRLLAQLGAGFDCASKNEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEV 132
            .:|:.|:.||||||||||.|::||....||.||||:||||:.||.::||....|...|.|:|.|:
 Frog    75 AIVKTLSLLGAGFDCASKTEIQLVQSIGVSSERIIYANPCKQVSQIKYAASCGVEKMTFDSEVEL 139

  Fly   133 YKLHTHYPNSNLIVRFKSEAKEAQCPLGDKFGCDADVDAAALML-LAKSLELKVTGTSFHVGSGC 196
            .|:..::||:.|::|..::..:|.|.|..|||  |.:..:.|:| .||.|.:::.|.||||||||
 Frog   140 MKVARNHPNAKLVLRIATDDSKAVCRLSVKFG--ATLKTSRLLLERAKELNVEIIGVSFHVGSGC 202

  Fly   197 SELQAYDRAIKKAKNLFKFGALLGYDMDFLDIGGGFPGSDDV--KFEKIAESVNTSVQRHFP-DE 258
            ::.|.|.:|:..|:.:|..||.||:.|..||||||||||:||  |||:|...:|.::.::|| |.
 Frog   203 TDPQTYVQAVSDARCVFDMGAELGFSMHLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPVDS 267

  Fly   259 RVHIIAEPGRFFVAAACTLVCKIHAKREIRNEAGKLD---------TVMYYLNDGVYGSFNCILY 314
            .|.|||||||::||:|.||...|.||:.:.||....|         |:|||:||||||||||||:
 Frog   268 GVTIIAEPGRYYVASAFTLAVNIIAKKVMVNEQSGSDDEEDAANDKTLMYYVNDGVYGSFNCILF 332

  Fly   315 DHQVVIAEHYLDNAESLPHLK---------------SLIWGPSCDALDKISEDLHLPNLNRGDLL 364
            ||               .|:|               |.||||:||.||:|.|...||.|..||.:
 Frog   333 DH---------------AHVKPVLTKKPKPDESFYSSSIWGPTCDGLDRIVERFDLPELQVGDWM 382

  Fly   365 GFRNMGAYTMPIASAFNGFEVPKTLYF 391
            .|.||||||:..:|.||||:.| |||:
 Frog   383 LFENMGAYTVAASSTFNGFQRP-TLYY 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Odc1NP_477052.2 PLPDE_III_ODC 30..391 CDD:143482 178/388 (46%)
odc1NP_001005441.1 PLPDE_III_ODC 37..409 CDD:143482 179/390 (46%)

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