DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odc1 and spe1

DIOPT Version :10

Sequence 1:NP_477052.2 Gene:Odc1 / 35766 FlyBaseID:FBgn0013307 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_594665.1 Gene:spe1 / 2542855 PomBaseID:SPAC144.04C Length:432 Species:Schizosaccharomyces pombe


Alignment Length:388 Identity:166/388 - (42%)
Similarity:241/388 - (62%) Gaps:25/388 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RRVIEECDLQRL------DQALNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDDPMVVRLLAQL 76
            :..|||.:...:      ..|..:.||:.|.|:|..|...|||::||||||||.||.|:.||.:.
pombe    48 KNTIEEIERAAVRGEPADSDAFFVADLNGVYRQLLRWHAKLPRVQPFYAVKCNPDPKVLALLNKF 112

  Fly    77 GAGFDCASKNEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPN 141
            |.|||||||.|::.:||..|||:||::||||:.::::.||....::..|.||..|:||:..|:||
pombe   113 GTGFDCASKGELEQILGLGVSPDRIVYANPCKAITYVRYAASKGINLMTFDNADELYKVKQHHPN 177

  Fly   142 SNLIVRFKSEAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQAYDRAI 206
            |.|::|..::...:.|.|..|||...| |...|:.:||||||.|.|.|||||||..:..|:..||
pombe   178 SRLLLRISTDDSNSLCRLSLKFGASLD-DTGKLLDIAKSLELNVVGVSFHVGSGSYDPSAFLDAI 241

  Fly   207 KKAKNLFKFGALLGYDMDFLDIGGGFPGSDDVKFEKIAESVNTSVQRHFPDERVHIIAEPGRFFV 271
            ::::.:|..|...|::.|.|||||||...   .|:.:|:.:.:::..:| |..:.:|:|||||||
pombe   242 QRSRQVFDQGLERGFNFDLLDIGGGFMND---SFDGVADLIRSALDTYF-DPSIRVISEPGRFFV 302

  Fly   272 AAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVIAE--------HYLDNA 328
            :::.||...:.|||::.:|    :.||||:|||||||.||||:|||..:|.        .|.|..
pombe   303 SSSFTLAVNVIAKRKLDDE----EKVMYYVNDGVYGSLNCILFDHQHPVARVLKCGSRFVYNDLV 363

  Fly   329 ESLPHLKSLIWGPSCDALDKISEDLHLP-NLNRGDLLGFRNMGAYTMPIASAFNGFEVPKTLY 390
            .:..| :..||||:||:||.|:.|.||| .||.||.:.|.:.||||:..||.||||:..:.:|
pombe   364 GTGQH-RCFIWGPTCDSLDVIANDAHLPYELNVGDWIYFEDAGAYTVAAASCFNGFKTSRIVY 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Odc1NP_477052.2 PLPDE_III_ODC 30..391 CDD:143482 163/370 (44%)
spe1NP_594665.1 PLPDE_III_ODC 67..426 CDD:143482 163/369 (44%)

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