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Protein Alignment Odc1 and Odc1

DIOPT Version :9

Sequence 1:	NP_477052.2	Gene:	Odc1 / 35766	FlyBaseID:	FBgn0013307	Length:	394	Species:	Drosophila melanogaster
Sequence 2:	NP_038642.2	Gene:	Odc1 / 18263	MGIID:	97402	Length:	461	Species:	Mus musculus

Alignment Length:	386	Identity:	172/386 - (44%)
Similarity:	236/386 - (61%)	Gaps:	26/386 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly    29 LDQALN------------ICDLSSVERKLRLWQKLLPRIKPFYAVKCNDDPMVVRLLAQLGAGFD 81
            |||.:|            :.||..:.:|...|.|.|||:.|||||||||...:|..||.:|.|||
Mouse    24 LDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFD 88

  Fly    82 CASKNEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIV 146
            ||||.|::||.|..|..||:|:||||:.||.::||..:.|...|.|:|.|:.|:...:|.:.|::
Mouse    89 CASKTEIQLVQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVL 153

  Fly   147 RFKSEAKEAQCPLGDKFGCDADVDAAALML-LAKSLELKVTGTSFHVGSGCSELQAYDRAIKKAK 210
            |..::..:|.|.|..|||  |.:..:.|:| .||.|.:.|.|.||||||||::.:.:.:|:..|:
Mouse   154 RIATDDSKAVCRLSVKFG--ATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDAR 216

  Fly   211 NLFKFGALLGYDMDFLDIGGGFPGSDD--VKFEKIAESVNTSVQRHFP-DERVHIIAEPGRFFVA 272
            .:|.....:|:.|..||||||||||:|  :|||:|...:|.::.::|| |..|.|||||||::||
Mouse   217 CVFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGRYYVA 281

  Fly   273 AACTLVCKIHAKREI-RNEAGKLD-------TVMYYLNDGVYGSFNCILYDHQVVIAEHYLDNAE 329
            :|.||...|.||:.: :.:.|..|       |.|||:|||||||||||||||..|.|........
Mouse   282 SAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVKALLQKRPKP 346

  Fly   330 SLPHLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGFEVPKTLY 390
            ...:..|.||||:||.||:|.|..:||.::.||.:.|.||||||:..||.||||:.|...|
Mouse   347 DEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNIYY 407

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.