DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Odc1 and LOC1280840

DIOPT Version :10

Sequence 1:NP_477052.2 Gene:Odc1 / 35766 FlyBaseID:FBgn0013307 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_320707.4 Gene:LOC1280840 / 1280840 VectorBaseID:AGAMI1_009886 Length:405 Species:Anopheles gambiae


Alignment Length:354 Identity:138/354 - (38%)
Similarity:209/354 - (59%) Gaps:6/354 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QALNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDDPMVVRLLAQLGAGFDCASKNEVKLVLGFD 95
            :.||:.:|..:..|.|.||..||.:.||||||||..|.::||||.||.||||||:.|:..|||..
Mosquito    30 EPLNVLNLDDIVAKHRNWQAKLPTVAPFYAVKCNSHPTILRLLAALGCGFDCASRAELDSVLGLG 94

  Fly    96 VSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIVRFKSEAKEAQCPLG 160
            |:|:||::|:|.:.:..:.:||:..|...|.|...|:.||..|||.:.||:|.:.:|..||..||
Mosquito    95 VTPDRIVYAHPNKSIGSIAHAKKLGVKRMTFDGSDELEKLARHYPEAELILRVRHDAAAAQLSLG 159

  Fly   161 DKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQAYDRAIKKAKNLFKFGALLGYDMDF 225
            .|||||...||..|:..|:.|.|.|.|.|||||||..:.:.:...|:||..:|:.|:.||..|:.
Mosquito   160 RKFGCDQVRDARPLLERARELGLSVIGVSFHVGSGSMDAECFYGGIRKAIEIFRVGSTLGMKMEL 224

  Fly   226 LDIGGGFPGSDDVKFEKIAESVNTSVQRHFPDERVHIIAEPGRFFVAAACTLVCKIHAKREIRNE 290
            ||:|||:||::...|::.|..:|.:::...|.. |.:|||||:::|.:|.|.:..:.:|...::.
Mosquito   225 LDVGGGYPGANGALFDRCAYYINKALKELVPTP-VTVIAEPGKYYVESAVTALVNVVSKSYEKDV 288

  Fly   291 AGKLDTVMYYLNDGVYGSFN-CILYDHQVVIAEHYLDNAESLPHLKSLIWGPSCDALDKISEDLH 354
            .|.:..|.||::||:|.:|: |.......::.|    :....|.::|:|:|.:....|.|.|::.
Mosquito   289 DGAVVRVRYYVDDGLYDTFDWCDDQGSGPLLQE----DKRGAPCVRSVIYGRTMCEHDVIREEIS 349

  Fly   355 LPNLNRGDLLGFRNMGAYTMPIASAFNGF 383
            ||....||.|.|.|.|||...:....|||
Mosquito   350 LPEHEIGDCLVFPNRGAYAKLLGRGHNGF 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Odc1NP_477052.2 PLPDE_III_ODC 30..391 CDD:143482 138/354 (39%)
LOC1280840XP_320707.4 None

Return to query results.
Submit another query.