DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odc1 and LOC100498433

DIOPT Version :10

Sequence 1:NP_477052.2 Gene:Odc1 / 35766 FlyBaseID:FBgn0013307 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_031752790.1 Gene:LOC100498433 / 100498433 XenbaseID:XB-GENE-29084215 Length:430 Species:Xenopus tropicalis


Alignment Length:400 Identity:150/400 - (37%)
Similarity:233/400 - (58%) Gaps:34/400 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QFYEREL--NIRRVIEECDLQRLDQALNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDDPMVVR 71
            ||.::::  ||        .|....|..:.||..:::|...:.|.|||:|||||||||....|::
 Frog    41 QFLQQKISNNI--------AQGHQDAFYVADLGDIKQKHWRFMKELPRVKPFYAVKCNSTNEVLQ 97

  Fly    72 LLAQLGAGFDCASKNEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLH 136
            :||.||.||||||..|:.:||...|....|::||||:.|||::||..|.|...|.|.|.|::|:.
 Frog    98 MLATLGTGFDCASMGEIDMVLRMGVPAADIVYANPCKQVSHIKYAAAHGVCKMTFDCEAELFKIA 162

  Fly   137 THYPNSNLIVRFKSEAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQA 201
            ..:|.:.:|:|..::.::|.|.|..|:|...: ....|:..||:|.::|.|.|||.||||....:
 Frog   163 AFHPKAEMILRIATDDRDAWCALSSKYGALVE-QCEDLLKTAKNLNIQVIGVSFHTGSGCKNTHS 226

  Fly   202 YDRAIKKAKNLFKFGALLGYDMDFLDIGGGFPGSDDVK--FEKIAESVNTSVQRHFPDER-VHII 263
            :.:||:.|:.:|:.|..|||.|..|||||||.|:.:.:  ||:.|:.:..|:.::||:.: |.||
 Frog   227 FCKAIEDARKVFEIGKKLGYQMRLLDIGGGFSGNSEFRPTFEEFADVIRQSLNQYFPNNKEVEII 291

  Fly   264 AEPGRFFVAAACTLVCKIHAKREIRNEAGKLDT---VMYYLNDGVYGSFNCILYDHQVV------ 319
            :||||::|.:|.|:...|..|:|:..:....::   ..|.|||||||:|    .|..:|      
 Frog   292 SEPGRYYVESAFTVALNIITKKEVYEKGADGNSRRKFSYILNDGVYGTF----LDFYLVKEKQKL 352

  Fly   320 ---IAEHYLDNAESLPHLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFN 381
               :.:.:....|..|   |.:|||:|..:||:..:.:||.|..||.:.|.|||||::.:::.||
 Frog   353 KPLLGKDFATEQELFP---SNLWGPTCTNVDKLVNEFYLPELETGDWVIFPNMGAYSISMSTTFN 414

  Fly   382 GFEVPKTLYF 391
            ||..|| :||
 Frog   415 GFPQPK-VYF 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Odc1NP_477052.2 PLPDE_III_ODC 30..391 CDD:143482 143/375 (38%)
LOC100498433XP_031752790.1 PLPDE_III_ODC 57..424 CDD:143482 144/375 (38%)

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