Protein Alignment: Nup44A and SEH1H

• Sequence 1: NP_610343.1
• Gene: Nup44A
• FlyBaseID: FBgn0033247
• Length: 354
• Species: Drosophila melanogaster
• Sequence 2: NP_564830.1
• Gene: SEH1H
• AraportID: AT1G64350
• Length: 326
• Species: Arabidopsis thaliana
• Alignment Length: 343
• Identity: 94/344 (27%)
• Similarity: 149/344 (43%)
• Gaps: 61/344 (18%)

  Fly    25 RRMATCSSDQTVKIWDEDG--------QGKWNV-------------TSSWKAHSGSIWRVSWAHP 68
            :.|||..|..|...|::.|        .||.::             ||..:....||.::.|...
plant     3 KSMATLDSGTTCSSWNQSGDRLAAGSLNGKLSIYESSTSSSSTFSCTSKVRVSESSIVKIVWLPS 67

  Fly    69 EFGQVVATCSFDRTASVWEEVIGEKVSSTNTPTRRWVRRTTLVDSRTSVTDVEFAPKYLGLLLAT 133
            |:|..||....|.:.|:|||:      |.:.....|....::.:..:.|.||:|......|.:..
plant    68 EYGDAVACVCEDGSLSIWEEL------SEDAHGLEWKLCKSMKNKSSQVLDVQFGVSRKSLKMVA 126

  Fly   134 ASADGIIRIYEAPDIMNLSQWPVQHEISNKL-PLSCL----------SWNT---STYMVTQLLAA 184
            |.:||.:|::|..:.:.|..|.:|.|..|.: .||.|          |||.   .....:.:||.
plant   127 AYSDGYLRVFELLNPLELKNWQLQAEFQNVIDSLSTLGKPSSLSASVSWNPMKGEEQEPSFVLAF 191

  Fly   185 GSDEAATPTGKVFLFAYSENSRKCV-KIDTVNDITDPVTDVAFAPNAGRTFHMLAVASK---DLY 245
            .||.....:.|::.|..:.|....| ::....|..|||..:::|||.||.:.::|||:.   .::
plant   192 NSDSPHLNSSKIWEFDEAHNRWLAVAELALPEDKGDPVYALSWAPNIGRPYEVVAVATHKGIGIW 256

  Fly   246 IVNLRGVTDATDI-SKLDIQTI-KFSEHNCPVWRVCWNMLATMLISTGDDGCVRLWRMNYNRQWR 308
            .|.|     |.|: .:|.::.: ..|.|...||::.|:|....|.|||.||.|:||:.|.|.:|.
plant   257 HVGL-----APDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLNGEWH 316

  Fly   309 CAAVLKAEGSGPTYEPAP 326
            ..|         |.||.|
plant   317 EQA---------TLEPVP 325

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nup44A	NP_610343.1	WD40	6..>309	CDD:225201	89/325 (27%)
		WD40	11..300	CDD:295369	86/316 (27%)
		WD40 repeat	16..55	CDD:293791	11/51 (22%)
		WD40 repeat	60..98	CDD:293791	12/38 (32%)
		WD40 repeat	118..159	CDD:293791	12/41 (29%)
		WD40 repeat	166..212	CDD:293791	14/60 (23%)
		WD40 repeat	221..267	CDD:293791	14/51 (27%)
		WD40 repeat	275..299	CDD:293791	12/24 (50%)
SEH1H	NP_564830.1	WD40	9..>317	CDD:225201	86/319 (27%)
		WD40	10..308	CDD:295369	83/309 (27%)
		WD40 repeat	13..54	CDD:293791	7/41 (17%)
		WD40 repeat	60..105	CDD:293791	12/51 (24%)
		WD40 repeat	110..163	CDD:293791	17/53 (32%)
		WD40 repeat	171..222	CDD:293791	11/51 (22%)
		WD40 repeat	229..277	CDD:293791	14/53 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010				D944756at2759
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			LDO	PTHR11024
Phylome	1	0.910		0.667	Consistency score
	3	3.020