DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Nup44A and AT3G01340

DIOPT Version :9

Sequence 1:	NP_610343.1	Gene:	Nup44A / 35762	FlyBaseID:	FBgn0033247	Length:	354	Species:	Drosophila melanogaster
Sequence 2:	NP_001030616.1	Gene:	AT3G01340 / 821216	AraportID:	AT3G01340	Length:	302	Species:	Arabidopsis thaliana

Alignment Length:	330	Identity:	99/330 - (30%)
Similarity:	157/330 - (47%)	Gaps:	52/330 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 EPIIADHKDVIHDVVFDYYGRRMATCSSDQTVKIWDEDGQGKWNVTSSWKAHSGSIWRVSWAHPE 69
            :.|...|.|.|||||.||||:|:||.|||.|:||......|.....::...|.|.:|:|:||||:
plant     4 QKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWAHPK 68

  Fly    70 FGQVVATCSFDRTASVWEEVIGEKVSSTNTPTRRWVRRTTLVDSRTSVTDVEFAPKYLGLLLATA 134
            ||.::|:||:|....:|:|  |.:        .:|.:.....|.:.||..:.:||..|||.||..
plant    69 FGSLLASCSYDGQIILWKE--GNQ--------NQWTQAHVFTDHKVSVNSIAWAPHELGLSLACG 123

  Fly   135 SADGIIRIYEAP-----DIMNLSQWPVQHEISNKLPLSCLSWNTSTY-----------MVTQLLA 183
            ::||.|.::.|.     |...:.|       ::.:.::.:||..:|.           .|.:|.:
plant   124 ASDGNISVFSARADGGWDTTKIDQ-------AHPVGVTSVSWAPATEPGALVSSGMIDPVYKLAS 181

  Fly   184 AGSDEAATPTGKVFLFAYSENSRKCVKIDTVNDITDPVTDVAFAPNAGRTFHMLAVASKD----L 244
            .|.|.    |.||:.|  |..|.|......:|..||.|.|||:|||.|.....:|..|:|    :
plant   182 GGCDS----TVKVWKF--SNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

  Fly   245 YIVNLRGVTDATDISKLDIQTIKFSEHNCPVWRVCWNMLATMLISTGDDGCVRLWRMNYNRQWRC 309
            :.:...|......:.| |.:|        |||||.|::...:|..:..:..|.:|:.:.:.:|..
plant   241 WTIGKEGEQWEGTVLK-DFKT--------PVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQ 296

  Fly   310 AAVLK 314
            ..|::
plant   297 VTVVE 301

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Nup44A	NP_610343.1	WD40	11..300	CDD:392136	95/308 (31%)
		WD40 repeat	16..55	CDD:293791	18/38 (47%)
		WD40 repeat	60..98	CDD:293791	15/37 (41%)
		WD40 repeat	118..159	CDD:293791	13/45 (29%)
		WD40 repeat	166..212	CDD:293791	14/56 (25%)
		WD40 repeat	221..267	CDD:293791	15/49 (31%)
		WD40 repeat	275..299	CDD:293791	7/23 (30%)
AT3G01340	NP_001030616.1	WD40	8..287	CDD:421866	95/310 (31%)
		WD40 repeat	15..54	CDD:293791	18/38 (47%)
		WD40 repeat	59..101	CDD:293791	16/51 (31%)
		WD40 repeat	107..148	CDD:293791	13/47 (28%)
		WD40 repeat	153..207	CDD:293791	14/59 (24%)
		WD40 repeat	214..251	CDD:293791	11/36 (31%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D944756at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920