Protein Alignment: Nup44A and AT3G01340

• Sequence 1: NP_610343.1
• Gene: Nup44A
• FlyBaseID: FBgn0033247
• Length: 354
• Species: Drosophila melanogaster
• Sequence 2: NP_001030616.1
• Gene: AT3G01340
• AraportID: AT3G01340
• Length: 302
• Species: Arabidopsis thaliana
• Alignment Length: 330
• Identity: 99/331 (30%)
• Similarity: 157/331 (47%)
• Gaps: 52/331 (16%)

  Fly     5 EPIIADHKDVIHDVVFDYYGRRMATCSSDQTVKIWDEDGQGKWNVTSSWKAHSGSIWRVSWAHPE 69
            :.|...|.|.|||||.||||:|:||.|||.|:||......|.....::...|.|.:|:|:||||:
plant     4 QKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWAHPK 68

  Fly    70 FGQVVATCSFDRTASVWEEVIGEKVSSTNTPTRRWVRRTTLVDSRTSVTDVEFAPKYLGLLLATA 134
            ||.::|:||:|....:|:|  |.:        .:|.:.....|.:.||..:.:||..|||.||..
plant    69 FGSLLASCSYDGQIILWKE--GNQ--------NQWTQAHVFTDHKVSVNSIAWAPHELGLSLACG 123

  Fly   135 SADGIIRIYEAP-----DIMNLSQWPVQHEISNKLPLSCLSWNTSTY-----------MVTQLLA 183
            ::||.|.::.|.     |...:.|       ::.:.::.:||..:|.           .|.:|.:
plant   124 ASDGNISVFSARADGGWDTTKIDQ-------AHPVGVTSVSWAPATEPGALVSSGMIDPVYKLAS 181

  Fly   184 AGSDEAATPTGKVFLFAYSENSRKCVKIDTVNDITDPVTDVAFAPNAGRTFHMLAVASKD----L 244
            .|.|.    |.||:.|  |..|.|......:|..||.|.|||:|||.|.....:|..|:|    :
plant   182 GGCDS----TVKVWKF--SNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

  Fly   245 YIVNLRGVTDATDISKLDIQTIKFSEHNCPVWRVCWNMLATMLISTGDDGCVRLWRMNYNRQWRC 309
            :.:...|......:.| |.:|        |||||.|::...:|..:..:..|.:|:.:.:.:|..
plant   241 WTIGKEGEQWEGTVLK-DFKT--------PVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQ 296

  Fly   310 AAVLK 314
            ..|::
plant   297 VTVVE 301

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nup44A	NP_610343.1	WD40	6..>309	CDD:225201	98/323 (30%)
		WD40	11..300	CDD:295369	96/309 (31%)
		WD40 repeat	16..55	CDD:293791	18/39 (46%)
		WD40 repeat	60..98	CDD:293791	15/38 (39%)
		WD40 repeat	118..159	CDD:293791	13/46 (28%)
		WD40 repeat	166..212	CDD:293791	14/57 (25%)
		WD40 repeat	221..267	CDD:293791	15/50 (30%)
		WD40 repeat	275..299	CDD:293791	7/24 (29%)
AT3G01340	NP_001030616.1	WD40	8..>289	CDD:225201	96/313 (31%)
		WD40	8..287	CDD:295369	96/311 (31%)
		WD40 repeat	15..54	CDD:293791	18/39 (46%)
		WD40 repeat	59..101	CDD:293791	16/52 (31%)
		WD40 repeat	107..148	CDD:293791	13/48 (27%)
		WD40 repeat	153..207	CDD:293791	14/60 (23%)
		WD40 repeat	214..251	CDD:293791	11/37 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010				D944756at2759
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
	1	1.010