Protein Alignment: Nup44A and sec13

• Sequence 1: NP_610343.1
• Gene: Nup44A
• FlyBaseID: FBgn0033247
• Length: 354
• Species: Drosophila melanogaster
• Sequence 2: NP_988967.1
• Gene: sec13
• XenbaseID: XB-GENE-944452
• Length: 320
• Species: Xenopus tropicalis
• Alignment Length: 350
• Identity: 101/350 (29%)
• Similarity: 160/350 (46%)
• Gaps: 75/350 (21%)

  Fly     4 VEPIIADHKDVIHDVVFDYYGRRMATCSSDQTVKIWDEDGQGKWNVTSSWKAHSGSIWRVSWAHP 68
            :..:...|:|:|||...||||.|:||||||::|||:|....|: .:.:..:.|.|.:|:|:||||
 Frog     5 INTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQ-ILIADLRGHEGPVWQVAWAHP 68

  Fly    69 EFGQVVATCSFDRTASVWEEVIGEKVSSTNTPTRRWVRRTTLVDSRTSVTDVEFAPKYLGLLLAT 133
            .:|.::|:||:||...:|:|..|           .|.:........:||..|.:||..|||:||.
 Frog    69 MYGNILASCSYDRKVIIWKEENG-----------TWEKTYEYTGHDSSVNSVCWAPHDLGLVLAC 122

  Fly   134 ASADGIIRIY----EAPDIMNLSQWPVQHEISNKLPLSC--LSWNTSTY--------------MV 178
            .|:||.|.|.    :.|       |.|: :|||...:.|  :||..|..              .:
 Frog   123 GSSDGAISILTYTGDGP-------WEVK-KISNAHTIGCNAVSWAPSVVPGSLVDQPSSQKPNYI 179

  Fly   179 TQLLAAGSDEAATPTGKVFLFAYSENSRKCVKIDTVNDITDPVTDVAFAPNAGRTFHMLAVASKD 243
            .:.::.|.|...    |:    :.|...:..:...:...:|.|.|||:||:.|.....:|..|:|
 Frog   180 KRFVSGGCDNLV----KI----WREEDGQWKEDQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD 236

  Fly   244 LYIVNLRGVTDATDISKLDIQTIKFSEHNC-----------PVWRVCWNMLATMLISTGDDGCVR 297
                           .::.|.|...:..||           .||.|.|::.|.:|..:|.|..|.
 Frog   237 ---------------GRVYIWTSDDAATNCWNPKLLHKFNDVVWHVSWSITANILAVSGGDNKVT 286

  Fly   298 LWRMNYNRQWRCAA-VLKAEGSGPT 321
            ||:.:.:.||.|.: |.|.:|:..|
 Frog   287 LWKESVDGQWACISDVNKGQGAVST 311

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nup44A	NP_610343.1	WD40	6..>309	CDD:225201	96/334 (29%)
		WD40	11..300	CDD:295369	94/320 (29%)
		WD40 repeat	16..55	CDD:293791	18/39 (46%)
		WD40 repeat	60..98	CDD:293791	15/38 (39%)
		WD40 repeat	118..159	CDD:293791	16/45 (36%)
		WD40 repeat	166..212	CDD:293791	8/62 (13%)
		WD40 repeat	221..267	CDD:293791	12/46 (26%)
		WD40 repeat	275..299	CDD:293791	10/24 (42%)
sec13	NP_988967.1	WD40	10..288	CDD:330360	93/321 (29%)
		WD40 repeat	61..101	CDD:293791	16/51 (31%)
		WD40 repeat	106..152	CDD:293791	20/54 (37%)
		WD40 repeat	160..208	CDD:293791	5/56 (9%)
		WD40 repeat	214..256	CDD:293791	14/57 (25%)
		WD40 repeat	264..290	CDD:293791	11/26 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010				D375879at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010