DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8726 and nish-1

DIOPT Version :10

Sequence 1:NP_610341.2 Gene:CG8726 / 35758 FlyBaseID:FBgn0033244 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_502016.2 Gene:nish-1 / 177981 WormBaseID:WBGene00008750 Length:497 Species:Caenorhabditis elegans


Alignment Length:531 Identity:110/531 - (20%)
Similarity:198/531 - (37%) Gaps:139/531 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 WTVLRRYNDFDRLDKSLRVSGIELPLPRKRIFGNMRPEFIAERKQALQEYINAVLMNPIL----- 109
            |||.|||:|||..|....:...:..||.|:..||...|||.||:..|::|:.|:|...:.     
 Worm    46 WTVERRYSDFDAYDVHRFLDRKKSFLPPKKRLGNKDLEFIEERRLELEKYVRALLELEVWYQKQK 110

  Fly   110 -ASSLP--AKRFVDPESYSQSFHDHAVQNAMLCLRNDTTWSLGGSMGAIGW----RLRKHYFKVT 167
             ..|||  ..:|.|       ||.:.:.:.:    :|.:..| |::|. ||    :....||:.|
 Worm   111 NVHSLPLITAKFFD-------FHQYEIHSIV----DDLSLRL-GNLGD-GWLESSQTSPKYFEFT 162

  Fly   168 ----------TKPPEKSS-NKQLVKSGSQTHQSKHFA-----------AGSSNGSGHSIDAGTLD 210
                      .:.||.:: :..:|.....|....|..           .|:||...:|:|. :|.
 Worm   163 PIELHAITERLRLPEPTAPDVNMVADIGNTIDFLHRVRALKIRGQKGYVGTSNIVWNSLDM-SLY 226

  Fly   211 PGSEVVAEWLEYGPDKFIDEKEIGGIMKSLMGLQHPHIEPVLLAAHTENGCLVIRKFHKHGTLKD 275
            ....:.|.|:...     |...|.|| ||:..                    .:|:...|.::|.
 Worm   227 FCKGLKALWIADS-----DVCRINGI-KSIRE--------------------TLRRLVVHYSMKK 265

  Fly   276 VLCMAANPKNTFLSKYGNPKGRTALSMKQVATYGKQILEALIFLHSKGYAYGHLHSGNIVIVDDC 340
            :..:..:.::.          .|.:.::::.|:  :.||.:           .|....|...|:.
 Worm   266 IKDLLFDEEDL----------ETGMLVEEMDTW--KCLEEV-----------DLSFNEIKCFDES 307

  Fly   341 VKLLDIENFLLGVPAFYRPFFMQHSKIHAIETIDVYCFGHVLFEMAMGYPLQESVVRQITECPEA 405
            :|||. |..:|.|         .::.|..|.:  ...|...|.|:    .|..:.:.:|....|.
 Worm   308 MKLLP-EVRVLNV---------SYNSITEIGS--NLAFLSSLTEL----DLSNNTLTKIDGWNEK 356

  Fly   406 LKCLLESILSKEACKAGLPTLEQL--LGHRFFLQYA-----------STESAGAAANAE------ 451
            |..:.:.|||:.|       :|.|  ||..:.|:|.           :.:..|.....|      
 Worm   357 LGNIKKLILSENA-------IEDLSGLGKLYSLEYLDAKGNNIQNLDAVQGIGKLPCLEILLLRD 414

  Fly   452 KPYFKLSLNAKELLKQAAIKSENRLRDEQKSVKNQKRIVRVQELMSSEEEKRKSKQKAKLEHKQS 516
            .|..||.....::|:....:|.....|.::....:...|||:..:...:|:::.::|.:.|..:.
 Worm   415 NPIRKLVEYRTKVLELFGERSSELKLDGRRPEARELDTVRVRMALRKAKEEKEEREKKRRERIEE 479

  Fly   517 KLKQQSSIQTN 527
            :::..|....|
 Worm   480 RIRYISGEDVN 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8726NP_610341.2 PX_MONaKA 13..132 CDD:132781 31/89 (35%)
Protein Kinases, catalytic domain 237..432 CDD:473864 34/196 (17%)
WH2 622..646 CDD:425359
nish-1NP_502016.2 PX_domain 18..137 CDD:470617 31/101 (31%)
LRR <245..>420 CDD:443914 42/241 (17%)
leucine-rich repeat 291..313 CDD:275380 8/33 (24%)
leucine-rich repeat 314..336 CDD:275380 5/32 (16%)
leucine-rich repeat 337..359 CDD:275380 6/25 (24%)
leucine-rich repeat 360..381 CDD:275380 8/27 (30%)
leucine-rich repeat 382..406 CDD:275380 3/23 (13%)
Blue background indicates that the domain is not in the aligned region.

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