DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cul1 and anapc2

DIOPT Version :9

Sequence 1:NP_523655.1 Gene:Cul1 / 35742 FlyBaseID:FBgn0015509 Length:774 Species:Drosophila melanogaster
Sequence 2:XP_031746476.1 Gene:anapc2 / 101731339 XenbaseID:XB-GENE-491168 Length:811 Species:Xenopus tropicalis


Alignment Length:847 Identity:162/847 - (19%)
Similarity:296/847 - (34%) Gaps:247/847 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 EHEKSLTRSQYMRFYTHVYDYCTSVSAAPSGRSSGKTGG--AQLVGKKLYDRLEQFL----KSYL 90
            ||...|....:....:.:..|..|:........:|..|.  :|::..|:|...:..|    .|:.
 Frog    94 EHCAVLLLDAFRLLVSRLEPYLRSLDILAKWIDTGLLGSSDSQMLRDKVYTMFKAILFFSTSSHF 158

  Fly    91 SELLTKFKAISGEEVLLSRYTKQWKSYQFSSTVLD-----GICNYLNRN-------------WVK 137
            .:::.:|            |::.:|.|.......|     |..:.:|.|             |..
 Frog   159 QDMIQQF------------YSRTFKIYMKQRKRGDGGGGGGSDSSMNENERESDSDERGADEWQC 211

  Fly   138 RECEEGQKGIYKIYRLALVAWKGHLFQVLN-------EPVTKAVLKSIEEERQGKLINRSLVRDV 195
            ..||..:...:.:..:........:|..||       :.||..:.|.|||..:.:          
 Frog   212 PGCESSRDQCWCLCAMGQFQQLSDIFHRLNLLERICSDAVTTILHKMIEERMEKR---------- 266

  Fly   196 IECYVELSFNEEDTDAEQQKLSVYKQNFENKFIADTSAFYEKE----SDAFLSTNTV-------T 249
              |                     :..:|..|:.:...:.||.    |..||...||       :
 Frog   267 --C---------------------RGEYERSFLGEFQEWIEKVIGWLSKVFLQDGTVPPTTPETS 308

  Fly   250 EYLK----HVEN---------RLEEETQRVRGF-NSKNGLSYLHETTADVLKSTCEEVLIEKHLK 300
            ..||    ||:.         |:||....:|.| .||..:                         
 Frog   309 STLKRWRCHVQRFFYRLYASMRIEELFNIIRDFPESKPAI------------------------- 348

  Fly   301 IFHTEFQNLLNADRNDDLKRMYSLVALSSKNLTDLKSILENHILHQGTEAIAKCCTTDAANDPKT 365
                           :|||..........:.||.||:.||..:||.|..      |:|...   .
 Frog   349 ---------------EDLKFCLERTNQRQQLLTSLKNALETRLLHPGVN------TSDIIT---L 389

  Fly   366 YVQTILDVHKKYNALVLTAFNNDNGFVAALDKAC---GKFINSN-------VVTIANSASKSPEL 420
            |:..|..:.:...::|:            |:.||   .|::.:.       |..:...|..|.:|
 Frog   390 YISAIKALRELDPSMVI------------LEVACEPIRKYLRTREDTVRQIVAGLTGDAEGSADL 442

  Fly   421 ---LAKYCDLLLKKSSKNPED-KELEDNL------------------NQVMVVFKYIEDKDVFQK 463
               |:| .|.:|:...::.:| .|.||.|                  :.:.::......|::|..
 Frog   443 ANELSK-ADPVLENGQESDDDVSEAEDWLPDPVDADPGKSSSKRRSSDIISLLVSIYGSKELFIN 506

  Fly   464 YYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRMFQDIGVSKDLNSYFKQYLAEKN 528
            .|..:||:||::..:.|.:.|...:..||...|.......:.|.:|:..|:.:||..:.  .|:.
 Frog   507 EYRTLLAERLLHQFNYSSEREIRNVELLKLRFGEAQMHYCEVMLKDMADSRRINSNIRD--EEEK 569

  Fly   529 LTME----IDFGIEVLSSGSWPFQLSNNFLLPSELERSVRQFNEFYAARHSGRKLNWLYQMCKGE 589
            |..|    .:....:|||..||........||.|::..:..:.:.|....:.|.|||.:.:  |.
 Frog   570 LPEEERPPFNVVAVILSSEFWPALKEEKLELPDEIKEVMDMYTKKYEKLKAMRTLNWKHHL--GL 632

  Fly   590 LIMNVNRNNSSTYTLQASTFQMSVLLQFNDQLSFTVQQLQDNTQTQQENLIQVLQILLKAKVL-- 652
            ::::|...: .|.:...|....:::|.|.::.::|:::|.:..:....:|.:.:...|:..||  
 Frog   633 VVLDVELAD-RTLSFPVSPVHAAIILHFQNKSTWTLEELSEVLKVPVASLRKKMAFWLQHGVLRE 696

  Fly   653 ------TSSDNENSLTPESTVELFLDYKNKKRRININQPLKTELKVEQETVHKHIEEDRKLL--- 708
                  |..:.|....||..|.:..|.:......:         :.:|:      ||:.:|.   
 Frog   697 DPPGTFTVIEEEQKDRPEKVVLIDSDEEGDSAMAS---------QADQK------EEEMQLFWTY 746

  Fly   709 IQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKV---PVIKKCIDILIEKEYLE-RMEGHKDT 769
            |||.:            |||.|..|.::.|..|..|   ||:.: |||...:.:|: ::..|:..
 Frog   747 IQAML------------TNLESLPLERIHTMLKMFVMTGPVVTE-IDIQELQSFLQKKVSDHQLV 798

  Fly   770 YS 771
            ||
 Frog   799 YS 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul1NP_523655.1 Cullin 21..669 CDD:279260 137/736 (19%)
CULLIN 454..593 CDD:214545 34/142 (24%)
Cullin_Nedd8 701..765 CDD:214883 20/70 (29%)
anapc2XP_031746476.1 CULLIN 498..635 CDD:214545 34/140 (24%)
ANAPC2 746..806 CDD:400832 20/68 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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