DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1941 and dga1

DIOPT Version :9

Sequence 1:NP_610317.1 Gene:CG1941 / 35718 FlyBaseID:FBgn0033214 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001343006.1 Gene:dga1 / 5802702 PomBaseID:SPCC1235.15 Length:345 Species:Schizosaccharomyces pombe


Alignment Length:339 Identity:123/339 - (36%)
Similarity:185/339 - (54%) Gaps:48/339 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 AMAFLILSFMILSFGSYFFVAAVLFYGSLLWRTI-----MVIYLVYVYANHKRTHSIMDG--NGW 77
            |:|..:.|..:....|::         ::||..:     :::||:::..:        ||  .| 
pombe    31 ALAVFLHSVSLTLTASWY---------TVLWAFLPFWPFLIVYLIWLIYD--------DGFVTG- 77

  Fly    78 KINRNNWL-----FRHYRDYFPVQLVKTAELPPNKNYILASFPHGILGTGI---SINMGLDISKW 134
            |..:..||     :|.:..|||::|.||.||...||||....||||:..|.   ..:.|.|.|| 
pombe    78 KDRQKRWLRNAPPYRWFCHYFPIRLHKTTELDSEKNYIFGYHPHGIISLGAFGGFASEGADFSK- 141

  Fly   135 LQLFPQVRPKVATLDQNFLTPIVRGLLRSWGLVSVSKEALVYLLTKSNDPKHKDNRDGFTSNAVA 199
              |||.:...|.||:.||..|:.|..|.:..:.||||::.|.:|::.            ..::|.
pombe   142 --LFPGINVSVLTLNSNFYVPVYRDYLMALNINSVSKKSCVSILSRK------------PGDSVL 192

  Fly   200 ILVGGAQEALDSHPGKYILTLKNRKGFVKMAIRTGSSIVPTFSFGEVDILDQVANPPNSRVRRFQ 264
            |::|||||:|.|.||:..|.||.|.||||:|..||||:||.|:|||.||.:||.|.|.:|:.:||
pombe   193 IVIGGAQESLLSRPGQNNLVLKKRFGFVKLAFLTGSSLVPCFAFGESDIFEQVDNNPRTRIYKFQ 257

  Fly   265 DFVKRITGISPLIPVGRGIFNYSFGFLPNRRRIVQVVGAPIDVVQSDQPDAAYVDKIHKQVIDDL 329
            :.||:|.|.:.....|||:.|.:||.:|.|:.|..|||.||||.:...|....:.::|::.|..|
pombe   258 EIVKKIAGFTVPFFYGRGLLNKTFGLMPWRKPINIVVGEPIDVPKKSHPTNQEIYEVHEEYIRRL 322

  Fly   330 EKMFAKYKDQYIPN 343
            |.::.||||.::||
pombe   323 EGLWNKYKDVFLPN 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1941NP_610317.1 LPLAT 50..340 CDD:473073 116/304 (38%)
dga1NP_001343006.1 LPLAT 54..333 CDD:473073 115/302 (38%)


Information from Original Tools:


Software error:

Can't use an undefined value as an ARRAY reference at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 1034.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 - -
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.