DRSC/TRiP Functional Genomics Resources

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Protein Alignment U2A and lrrc51

DIOPT Version :10

Sequence 1:NP_610315.1 Gene:U2A / 35713 FlyBaseID:FBgn0033210 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001070236.1 Gene:lrrc51 / 767801 ZFINID:ZDB-GENE-060929-962 Length:181 Species:Danio rerio


Alignment Length:119 Identity:32/119 - (26%)
Similarity:63/119 - (52%) Gaps:23/119 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 IDLSDNDLRKLDNLPHLPRLKCLLLNNNRILRISEGLEEAVPNLGSIILTGNNLQELSDLEPLVG 111
            :|||.|:::.:|::  |.:||.|.|                     :.|.|||:||||:::.|..
Zfish    74 LDLSFNEIKHIDSV--LTQLKELRL---------------------LYLHGNNIQELSEVDKLAV 115

  Fly   112 FTKLETICLLINPVSTKPNYREYMAYKFPQLRLLDFRKIKQKDRQAAQEFFRTK 165
            ...|.||.|..||:.::.:||.::....|.::::||..:.:::|:....:.::|
Zfish   116 LPSLHTITLHGNPIVSERDYRAHLIAMLPHVKMIDFSAVTKQERELTSVWQKSK 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
U2ANP_610315.1 LRR_9 1..175 CDD:405295 32/119 (27%)
leucine-rich repeat 22..43 CDD:275380
leucine-rich repeat 46..65 CDD:275378 6/17 (35%)
leucine-rich repeat 66..89 CDD:275378 4/22 (18%)
leucine-rich repeat 90..114 CDD:275378 9/23 (39%)
lrrc51NP_001070236.1 LRR_9 <46..160 CDD:405295 30/108 (28%)
leucine-rich repeat 71..93 CDD:275378 7/20 (35%)
leucine-rich repeat 94..118 CDD:275378 11/44 (25%)
Blue background indicates that the domain is not in the aligned region.

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