Protein Alignment: U2A and Lrrc51

• Sequence 1: NP_610315.1
• Gene: U2A
• FlyBaseID: FBgn0033210
• Length: 265
• Species: Drosophila melanogaster
• Sequence 2: NP_001099754.1
• Gene: Lrrc51
• RGDID: 1565856
• Length: 192
• Species: Rattus norvegicus
• Alignment Length: 162
• Identity: 42/163 (26%)
• Similarity: 65/163 (40%)
• Gaps: 47/163 (29%)

  Fly    25 DLRGYK--IPQI----ENLGATLDQFDTIDLSDNDLRKLDNLPHLPRLKCLLLNNNRILRISEGL 83
            ||:.:.  :.|:    |||.       .||||.|||..:|     |.|....
  Rat    63 DLKDFNQVVSQLLQHPENLA-------WIDLSFNDLTTID-----PVLTTFF------------- 102

  Fly    84 EEAVPNLGSIILTGNNLQELSDLEPLVGFTKLETICLLINPVSTKPNYREYMAYKFPQLRLLDFR 148
                 ||..:.|.||::..|.::..|....:|.::.|..||:..:..||:|:....|::...||.
  Rat   103 -----NLSVLYLHGNSIHRLGEVNKLAVLPRLRSLTLHGNPIEEEKGYRQYVLCNLPRITTFDFS 162

  Fly   149 KIKQKDRQAAQEF---------FRTKQGKDVL 171
            .:.:.||..|:.:         .|.||  |||
  Rat   163 GVTKADRSTAEVWKRMNIKPKKVRIKQ--DVL 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
U2A	NP_610315.1	LRR_9	1..175	CDD:258718	42/163 (26%)
		leucine-rich repeat	22..43	CDD:275380	6/24 (25%)
		LRR_4	46..81	CDD:289563	10/35 (29%)
		leucine-rich repeat	46..65	CDD:275378	9/19 (47%)
		leucine-rich repeat	66..89	CDD:275378	1/23 (4%)
		leucine-rich repeat	90..114	CDD:275378	6/24 (25%)
Lrrc51	NP_001099754.1	LRR 1	49..71		2/8 (25%)
		leucine-rich repeat	52..80	CDD:275380	4/17 (24%)
		LRR_8	80..139	CDD:290566	23/89 (26%)
		LRR 2	80..101		12/33 (36%)
		leucine-rich repeat	81..103	CDD:275380	11/52 (21%)
		LRR 3	103..124		7/21 (33%)
		leucine-rich repeat	104..128	CDD:275380	6/24 (25%)
		leucine-rich repeat	129..155	CDD:275380	8/26 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E2759_KOG1644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010				D1447031at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910