DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and RPT3

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_010682.3 Gene:RPT3 / 852003 SGDID:S000002802 Length:428 Species:Saccharomyces cerevisiae


Alignment Length:418 Identity:159/418 - (38%)
Similarity:229/418 - (54%) Gaps:67/418 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DYLGDDQRKVKHDEKEDKEIKSLDEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQVNELTGIKE 67
            ||:.|:||.:|.:.|..:|         |:          |.|:|:...|.:.::.:::.|||..
Yeast    66 DYIKDEQRHLKRELKRAQE---------EV----------KRIQSVPLVIGQFLEPIDQNTGIVS 111

  Fly    68 SDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPT 132
            |.||::                    .|.|....::.:...|...:.:.:.:..:||:       
Yeast   112 STTGMS--------------------YVVRILSTLDRELLKPSMSVALHRHSNALVDI------- 149

  Fly   133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLH 197
                                |||..|.::::|...:||||||:||||...|.:::||.||.||:.
Yeast   150 --------------------LPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQ 194

  Fly   198 PEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFE 262
            .:.:..:||:||:||||:||||||||:..:||||.|.|.||||.|||.|.||:|||.||||::|.
Yeast   195 ADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFR 259

  Fly   263 MARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTL 327
            :||.....:||.||:|:|...|||...|.|.||||.::||:.|:||||...|:||:|||||.|||
Yeast   260 LARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTL 324

  Fly   328 DPALMRPGRLDRKVEF-GLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTE 391
            ||||:||||||||:|| .|.|:..|..||...|..||:..:...|.|.....:.:||.|.::..|
Yeast   325 DPALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQE 389

  Fly   392 AGMFAIRARRKVATEKDFLEAVKKVIKS 419
            ||:.|:|..|.|..:.|..||....:|:
Yeast   390 AGLRAVRKNRYVILQSDLEEAYATQVKT 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 140/333 (42%)
RPT3NP_010682.3 PTZ00454 46..428 CDD:240423 159/418 (38%)

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