DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and RPT3

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_200637.1 Gene:RPT3 / 835941 AraportID:AT5G58290 Length:408 Species:Arabidopsis thaliana


Alignment Length:414 Identity:161/414 - (38%)
Similarity:247/414 - (59%) Gaps:52/414 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EIKSLDEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQVNELTGIKESDTGLAPPALWDLAADKQ 85
            ::.:.||.|:     ||:      :||:|..:        |.|.|:|           :...|:|
plant    21 DLSTADEEDL-----YGR------LKSLERQL--------EFTDIQE-----------EYVKDEQ 55

  Fly    86 ------ILQNEQ--------PLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDIEE 136
                  :|:.::        ||.:.:..:::    |....|:.....:.:.|.:..::....::.
plant    56 KNLKRELLRAQEEVKRIQSVPLVIGQFMEMV----DQNNGIVGSTTGSNYYVRILSTINRELLKP 116

  Fly   137 GMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKF 201
            ...|.:.|:...:...|||:.|.:::::...:||||:|:|:|||..|.:::||.||.||.|.|.:
plant   117 SASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELY 181

  Fly   202 VNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARS 266
            ..:||:||:||||:||||||||:.|:||||.|.|.||||:|||.||||:|||.||||::|.:|:.
plant   182 KQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKE 246

  Fly   267 KKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL 331
            ....:||.||:|||..||||...|.|.||||.::||:||:||||...|:||:|||||.|||||||
plant   247 NAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPAL 311

  Fly   332 MRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRF-DLLARLCPNS-TGAEIRSVCTEAGM 394
            :||||||||:||.|||:..:..:|::....|::..::.. |.::|  |:. :.|||.::|.||||
plant   312 LRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSR--PDKISAAEIAAICQEAGM 374

  Fly   395 FAIRARRKVATEKDFLEAVKKVIK 418
            .|:|..|.|...|||.:..:..:|
plant   375 HAVRKNRYVILPKDFEKGYRANVK 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 146/341 (43%)
RPT3NP_200637.1 PTZ00454 15..408 CDD:240423 161/414 (39%)

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