Protein Alignment Rpt1 and RPT6A

DIOPT Version :10

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_568389.1
• Gene: RPT6A / 832121
• AraportID: AT5G19990
• Length: 419
• Species: Arabidopsis thaliana
• Alignment Length: 415
• Identity: 195/415 - (46%)
• Similarity: 265/415 - (63%)
• Gaps: 14/415 - (3%)

  Fly     5 LGDDQRKVKHDEKEDKEIKSLDEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQVNELTGIKESD 69
            :|.|.|:.:...:|...:|.......|.||.|    |.:.|..::..:::....:|.|    |:.
plant     4 VGVDSRRPETAMEETCNVKGAAAKQGEGLKQY----YLQHIHELQRQLRQKTNNLNRL----EAQ 60

  Fly    70 TGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDI 134
            .......:..|..:.|:|| |....|....|::..:    |.::.|....|:|||:..|:..|.|
plant    61 RNELNSRVRMLREELQLLQ-EPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDITKI 120

  Fly   135 EEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 199
            ....||.:..:.|.:|:.||.|:||.|.:|:||..||.||..:||..:||::::||:|.|:.|||
plant   121 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPE 185

  Fly   200 KFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 264
            .|.:|||..||||||:|||||||||.|||||:.||..||||.||||||||:|||:|||||||.||
plant   186 LFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA 250

  Fly   265 RSKKACLIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLD 328
            |.....:||.||||:||.||.:.|:| ||:|||||||||:||||||:....|||||||||.|.||
plant   251 REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315

  Fly   329 PALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAG 393
            .||:||||:|||:||..|:::.|..|.|||:|.|::.|.|....:|.....::|||:::||||||
plant   316 QALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380

  Fly   394 MFAIRARRKVATEKDFLEAVKKVIK 418
            |||:|.||...|::||..||.||:|
plant   381 MFALRERRVHVTQEDFEMAVAKVMK 405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	PRK03992	88..430	CDD:179699	178/332 (54%)
RPT6A	NP_568389.1	PRK03992	36..413	CDD:179699	186/379 (49%)