DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and AT4G30310

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_194760.2 Gene:AT4G30310 / 829154 AraportID:AT4G30310 Length:579 Species:Arabidopsis thaliana


Alignment Length:164 Identity:30/164 - (18%)
Similarity:55/164 - (33%) Gaps:51/164 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 IGGARFDDGAGG----DNEVQRTMLELINQLDGFDPR-----GNIKVLMATNRPDTLDPALMRPG 335
            :|.:..|..|||    :::::...|...:.:|....|     |.....||.:|.....|.:..|.
plant   273 VGTSLIDAHAGGVGVMESKLESDSLTKESDVDTLCSRMVLVCGTSTCHMAVSREKLFIPGVWGPF 337

  Fly   336 RLDRKVEFGLPDQDGRS-------HIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAG 393
            ......|:.| .:.|:|       ||.:.|..|            .||                 
plant   338 WSAMVPEYWL-TEGGQSATGALLDHIIENHVAS------------PRL----------------- 372

  Fly   394 MFAIRARRKVATEKDFLEAVKKVIKSYAKFSATP 427
                 |.|..:.:....|.:..::|:.|:.:::|
plant   373 -----ANRAASQKVSVFELLNNILKTMAEDTSSP 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 30/164 (18%)
AT4G30310NP_194760.2 ASKHA_NBD_FGGY_D-RBK 15..571 CDD:466800 30/164 (18%)

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