Protein Alignment Rpt1 and CCP1

DIOPT Version :10

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_973600.1
• Gene: CCP1 / 818020
• AraportID: AT2G34560
• Length: 393
• Species: Arabidopsis thaliana
• Alignment Length: 244
• Identity: 81/244 - (33%)
• Similarity: 132/244 - (54%)
• Gaps: 4/244 - (1%)

  Fly   166 VEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 230
            :...|::.:..:.|.:...:.|:|.|..|:.:|..|..| :.|.||:|||||||||||:.|:|||
plant   103 IRGNPNIKWESIKGLENAKKLLKEAVVMPIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLAKAVA 166

  Fly   231 NRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEV 295
            ...:..|..:..|.:|.|:.|:..:::|.||::||......||.||||||...|..:|.......
plant   167 TECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEGRSEHEAS 231

  Fly   296 QRTMLELINQLDGFDPRGN-IKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHA 359
            :|...||:.|:||...... :.||.|||.|..||.|::|  ||::::...|||.:.|..:|::..
plant   232 RRLKTELLIQMDGLQKTNELVFVLAATNLPWELDAAMLR--RLEKRILVPLPDPEARRGMFEMLI 294

  Fly   360 RSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKD 408
            .|...:..:..|:|.......:|::||.:|.||.|..:|....:..:::
plant   295 PSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTLAILEDRE 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	PRK03992	88..430	CDD:179699	81/244 (33%)
CCP1	NP_973600.1	RecA-like_VPS4-like	114..278	CDD:410917	64/166 (39%)
		AAA_lid_3	306..343	CDD:465537	10/36 (28%)