DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and Gk

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_008771496.1 Gene:Gk / 79223 RGDID:70893 Length:587 Species:Rattus norvegicus


Alignment Length:40 Identity:15/40 - (37%)
Similarity:21/40 - (52%) Gaps:4/40 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 IKSIEEDIQKAVKQVNELTG--IKESDTGLAPPALWDLAA 82
            |||.|| |:|..|:|....|  ...:.:||..| .|:.:|
  Rat   373 IKSSEE-IEKLAKEVGTSYGCYFVPAFSGLYAP-YWEPSA 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699
GkXP_008771496.1 ASKHA_NBD_FGGY_GK1-3-like 11..544 CDD:466802 15/40 (38%)
Blue background indicates that the domain is not in the aligned region.

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