DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and Gk1

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_524655.1 Gene:Gk1 / 43913 FlyBaseID:FBgn0025592 Length:538 Species:Drosophila melanogaster


Alignment Length:194 Identity:40/194 - (20%)
Similarity:68/194 - (35%) Gaps:57/194 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLD----PA---LMRP-- 334
            :|.||.|:......|.:|.:              |.|:. ||:...::||    ||   |..|  
  Fly   333 SIAGAAFNWLRDNMNLIQNS--------------GQIET-MASTVDNSLDVYFVPAFNGLYAPYW 382

  Fly   335 GRLDRKVEFGLPDQDGRSHI---------FKIHARSMSVERDIRF--------------DLLARL 376
            .:..|.|..||.::....||         |::.....|:.:|.:.              :|..:|
  Fly   383 NQDARGVICGLSEETTSEHIVRATLEAVCFQVRDILDSMHKDCKIPLAKLMVDGGMTVNNLFLQL 447

  Fly   377 CPNSTGAEI--RSVCTEAGMFAIRARRKVATEKDFLEA------VKKVIKSYAKFSATPRYMTY 432
            ..:..|.::  ..:.....:.|..|..|....:..:||      .::.||  ...|||.|.:.|
  Fly   448 QSDLVGIQVLRAKIAETTALGAAMAAYKAVENRYQMEAPLSKSGPREAIK--PSISATDRNLRY 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 39/190 (21%)
Gk1NP_524655.1 ASKHA_NBD_FGGY_GK1-3-like 18..519 CDD:466802 40/194 (21%)

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