Protein Alignment Rpt1 and psmc5

DIOPT Version :10

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_989358.1
• Gene: psmc5 / 394988
• XenbaseID: XB-GENE-999928
• Length: 414
• Species: Xenopus tropicalis
• Alignment Length: 418
• Identity: 199/418 - (47%)
• Similarity: 264/418 - (63%)
• Gaps: 35/418 - (8%)

  Fly    11 KVKHDEKEDKEIKSLDE--GDIELLKTYGQSQYHKS--------IKSIEEDIQKAVKQVNELTGI 65
            ||..|..|..|   :||  |.|      |..||:.|        :....:::::...|.|||.
 Frog     8 KVAGDGMEQME---MDESRGGI------GLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELN-- 61

  Fly    66 KESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVA 130
                   |...|  |..:.|:|| ||...|....:.:    |..|.::.|....|||||:..::.
 Frog    62 -------AKVRL--LREELQLLQ-EQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDIDKNID 112

  Fly   131 PTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPL 195
            ..|:....||.:..:.|.:|..||.|:||.|::|.||..||.||..:||..:||::::||:|.|:
 Frog   113 INDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPV 177

  Fly   196 LHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVREL 260
            .|||.|..|||..||||||:|||||||||.|||||:.||..||||.|||||||::||||||||||
 Frog   178 KHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVREL 242

  Fly   261 FEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 325
            |.|||.....:||.||||:||.:|.:.|:|||:|||||||||:||||||:...||||:|||||.|
 Frog   243 FVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRID 307

  Fly   326 TLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCT 390
            .||.||:||||:|||:||..|:::.|..|.|||:|.|::.|.|....:|.|.|.::|||::.|||
 Frog   308 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCT 372

  Fly   391 EAGMFAIRARRKVATEKDFLEAVKKVIK 418
            ||||:|:|.||...|::||..||.||::
 Frog   373 EAGMYALRERRVHVTQEDFEMAVAKVMQ 400

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	PRK03992	88..430	CDD:179699	177/331 (53%)
psmc5	NP_989358.1	PRK03992	32..408	CDD:179699	187/385 (49%)