DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and wecF

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:YP_026257.1 Gene:wecF / 2847677 ECOCYCID:G7800 Length:359 Species:Escherichia coli


Alignment Length:211 Identity:33/211 - (15%)
Similarity:59/211 - (27%) Gaps:87/211 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 HPEKFVNLGIE-------PPKGVLLF-GPPGTGKTLCARAVANRTDACFI--------------- 238
            |..:|:.:|.:       |...|..| |.....:.:.|:|.|||....|.               
E. coli    33 HAREFMVVGKDDGLSDSCPALSVQFFPGKKSLAEAVIAKAKANRQQRFFFHGQFNPTLWLALLSG 97

  Fly   239 ---------RVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNE 294
                     .:.|::|.:...|...::...|..:|:.:..|:                       
E. coli    98 GIKPSQFFWHIWGADLYELSSGLRYKLFYPLRRLAQKRVGCV----------------------- 139

  Fly   295 VQRTMLELINQLDGFDPRGNIKVLMATNR---------PDTLDPAL-------MRPGRLDRKVEF 343
                          |..||::.....|:.         |..:||:|       .|.|::  .:..
E. coli   140 --------------FATRGDLSFFAKTHPKVRGELLFFPTRMDPSLNTMANDRQREGKM--TILV 188

  Fly   344 GLPDQDGRSHIFKIHA 359
            |........||..:.|
E. coli   189 GNSGDRSNEHIAALRA 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 33/211 (16%)
wecFYP_026257.1 Glyco_transf_56 1..356 CDD:429459 33/211 (16%)

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