DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and SHPK

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_037408.2 Gene:SHPK / 23729 HGNCID:1492 Length:478 Species:Homo sapiens


Alignment Length:65 Identity:16/65 - (24%)
Similarity:29/65 - (44%) Gaps:3/65 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRE---LFEMARSKKACLIFFDEIDAIGGA 283
            :.||...|.|......|:.:....|::.:|.|:.:.|.   ..|:.|:....:.|..::||..||
Human   400 RALCRGIVQNLHSMLPIQQLQEWGVERVMGSGSALSRNDVLKQEVQRAFPLPMSFGQDVDAAVGA 464

  Fly   284  283
            Human   465  464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 16/65 (25%)
SHPKNP_037408.2 ASKHA_NBD_FGGY_SHK 6..468 CDD:466796 16/65 (25%)

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