DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and LOC1272945

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_061498463.1 Gene:LOC1272945 / 1272945 VectorBaseID:AGAMI1_011760 Length:412 Species:Anopheles gambiae


Alignment Length:419 Identity:167/419 - (39%)
Similarity:235/419 - (56%) Gaps:72/419 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DYLGDDQRKVKHDEKEDKEIKSLDEGDIELLKTYGQSQYH-KSIKSIEEDIQKAVKQVNELTGIK 66
            :|:.|:||.:|                    |.|..:|.. |.|:|:...|.:.::.|::.|||.
Mosquito    53 EYIKDEQRNLK--------------------KEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIV 97

  Fly    67 ESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAP 131
            .|.||                .|    ...|....|:.:...|...:.:.:.:..:||:      
Mosquito    98 GSTTG----------------SN----YYVRILSTIDRELLKPSASVALHKHSNALVDV------ 136

  Fly   132 TDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLL 196
                                 |||:.|.:::|:..::||||.|||:||...|.:::||.||.||.
Mosquito   137 ---------------------LPPEADSSISMLNADEKPDVQYSDIGGMDMQKQEIREAVELPLT 180

  Fly   197 HPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 261
            |.|.:..:||:||:|||::||||.|||:.|:|||:.|.|.||||:|||.||||:|||.||||::|
Mosquito   181 HFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVF 245

  Fly   262 EMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT 326
            .:|:.....:||.||||||...|||...|.|.||||.:|||:||:||||...|:||:|||||.||
Mosquito   246 RLAKENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADT 310

  Fly   327 LDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRF-DLLARLCPNS-TGAEIRSVC 389
            |||||:||||||||:||.|||:..:..||......|::..|:.. |.:||  |:. :||:|.::|
Mosquito   311 LDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEDVDLEDFVAR--PDKISGADINAIC 373

  Fly   390 TEAGMFAIRARRKVATEKDFLEAVKKVIK 418
            .||||.|:|..|.:...|||.:..|..||
Mosquito   374 QEAGMHAVRENRYIVLAKDFEKGYKNNIK 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 148/333 (44%)
LOC1272945XP_061498463.1 None

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