DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and zgc:172295

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_073801865.1 Gene:zgc:172295 / 100136866 ZFINID:ZDB-GENE-080204-72 Length:572 Species:Danio rerio


Alignment Length:146 Identity:30/146 - (20%)
Similarity:50/146 - (34%) Gaps:45/146 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 DNEVQRTMLELINQLDG------FDPRG--------NIKVLMATNRPDTLDPALMRPGRLDRKVE 342
            |...|.|:..|||:..|      .|..|        .:|:....:..:.:..|:     |..:..
Zfish   123 DLRTQSTVERLINKTPGKNKNHLKDKTGLPISTYFSAVKLRWLMDNVEKVHEAV-----LSHRAM 182

  Fly   343 FGLPD----------QDG-----------RSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIR 386
            ||..|          ::|           |:.:|.||......|..|.||:...:.|     ::|
Zfish   183 FGTVDSWLIWCLTGGKNGGVHCTDVTNASRTMLFNIHTMDWDPELCIYFDIPMGILP-----KVR 242

  Fly   387 SVCTEAGMFAIRARRK 402
            |.....|:..|.::.|
Zfish   243 SSSEIYGLMKISSKLK 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 30/146 (21%)
zgc:172295XP_073801865.1 None

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