Protein Alignment CG1603 and E(var)3-9

DIOPT Version :10

• Sequence 1: NP_610290.2
• Gene: CG1603 / 35683
• FlyBaseID: FBgn0033185
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_649852.2
• Gene: E(var)3-9 / 41073
• FlyBaseID: FBgn0260243
• Length: 588
• Species: Drosophila melanogaster
• Alignment Length: 115
• Identity: 36/115 - (31%)
• Similarity: 48/115 - (41%)
• Gaps: 11/115 - (9%)

  Fly   447 PYLCSFCPRRFDRHVDMD---RHKLRSHFERKLKCQYCEKSF--AVDTDLKVHTLIHTGERPHVC 506
            |.:|  |...|....|.|   .|..|:|..:..:|..|.|.|  |.::.:|.|...|..:|...|
  Fly   249 PVVC--CKLCFYESPDQDAHMEHMRRTHLLKDWECHICGKKFTNAQESRIKFHIKYHKLQRHVKC 311

  Fly   507 DICGKTFRLKLLLDHHVNGVHLNIRPYSCNMCTKTFRKKFELANHIKGHL 556
            .:||.....|..|..|...||:..:   |..|.||. |...|..|:|.||
  Fly   312 PVCGFICSSKETLKEHKQAVHVRTK---CTYCGKTV-KNATLHAHLKKHL 357

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1603	NP_610290.2	MADF_DNA_bdg	202..287	CDD:463144
		MADF_DNA_bdg	321..408	CDD:463144
		C2H2 Zn finger	420..441	CDD:275368
		COG5048	<424..583	CDD:227381	36/115 (31%)
		C2H2 Zn finger	450..471	CDD:275368	7/23 (30%)
		C2H2 Zn finger	478..498	CDD:275368	7/21 (33%)
		C2H2 Zn finger	506..527	CDD:275368	6/20 (30%)
		C2H2 Zn finger	535..555	CDD:275368	8/19 (42%)
		C2H2 Zn finger	563..583	CDD:275368
E(var)3-9	NP_649852.2	zf-AD	18..102	CDD:462262
		zf-C2H2_2	253..>334	CDD:463690	24/80 (30%)
		C2H2 Zn finger	253..274	CDD:275368	6/20 (30%)
		C2H2 Zn finger	281..303	CDD:275368	7/21 (33%)
		PHA00732	310..>358	CDD:177300	18/52 (35%)
		C2H2 Zn finger	311..332	CDD:275368	6/20 (30%)
		C2H2 Zn finger	337..356	CDD:275368	8/19 (42%)