DRSC/TRiP Functional Genomics Resources

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Protein Alignment: fa2h and Msmo1

Sequence 1:NP_610279.3 Gene:fa2h FlyBaseID:FBgn0050502 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_079712.1 Gene:Msmo1 MGIID:1913484 Length:293 Species:Mus musculus

Alignment Length:250 Identity:51/250 (20%)
Similarity:82/250 (33%) Gaps:97/250 (39%)


  Fly   120 VDWSKAMLPQIANITDCYDEWVHKPVDRPLRLFDPWYLEMCTKTPWWLVPLFWIPVIVKCAVEEF 184
            |::..::||:             .|:..|.:  :.|...:...|.:.:..  |..:||..|:   
Mouse    17 VEYVDSLLPE-------------NPLQEPFK--NAWVYMLDNYTKFQIAT--WGSLIVHEAI--- 61

  Fly   185 TTAWQDSNQLAVFSGYFLFGV--LLWSFLEYTLHRWVFHVKLSNKSGSWLCT-----FHFMIH-- 240
                           ||||.:  .|:.|:.|.....:...|.....|.|.|.     .||.|.  
Mouse    62 ---------------YFLFSLPGFLFQFIPYMRKYKIQKDKPETFEGQWKCLKKILFNHFFIQLP 111

  Fly   241 ---GLHH-----KVPFDPMRLVFPPLPGAVLAAVIYTPLSFVLSHPR--VILSGALAGYLCYDMM 295
               |.::     .:|:|..|:                        ||  :.|:..|...:..|..
Mouse   112 LICGTYYFTEFFNIPYDWERM------------------------PRWYLTLARCLGCAVIEDTW 152

  Fly   296 HYYLHYGNPSLWAFVHMKR---YHH--HHHFSHQTLGYGISS----PLWDVVFKT 341
            ||:||       ..:|.||   |.|  ||.|.   ..:||.:    ||..::..|
Mouse   153 HYFLH-------RLLHHKRIYKYIHKVHHEFQ---APFGIEAEYAHPLETLILGT 197

Known Domains:


GeneSequenceDomainRegion External IDIdentity
fa2hNP_610279.3 Cyt-b5 6..73 CDD:278597
FA_hydroxylase 117..341 CDD:294712 50/249 (20%)
Msmo1NP_079712.1 ERG3 62..274 CDD:225546 40/170 (24%)
FA_hydroxylase 143..274 CDD:282034 19/65 (29%)
Histidine box-1 157..161 1/11 (9%)
Histidine box-2 170..174 2/4 (50%)
Histidine box-3 249..255
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG3000
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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