DRSC/TRiP Functional Genomics Resources

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Protein Alignment kappaB-Ras and Rgk3

DIOPT Version :10

Sequence 1:NP_610278.1 Gene:kappaB-Ras / 35667 FlyBaseID:FBgn0040513 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001286670.1 Gene:Rgk3 / 5740446 FlyBaseID:FBgn0085426 Length:486 Species:Drosophila melanogaster


Alignment Length:146 Identity:35/146 - (23%)
Similarity:58/146 - (39%) Gaps:53/146 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KVLVCGMKGVGKTALIEQL-----VYGHVNPETELHPTIEDIYVASVDTGRGGARETLRIYDTAG 70
            :|.:.|..||||.||:.|.     :..:..||.:                  .|.:.:.|.    
  Fly   236 RVEMLGSAGVGKQALLSQFRTSDCINAYDGPECD------------------DAEQNVSII---- 278

  Fly    71 LQGEQQQL--------PRHYLQFPDAFVLVYDPMDPRS-------LDMLADIKADIEKHKEKKEI 120
            |.|.:.:|        .:..|:..|||::||..:|..|       |..|.|:  |:.:|:     
  Fly   279 LNGTESELKFLTGNPESKDELEQADAFLVVYSCIDKESFTRAKQILSRLQDM--DLLRHR----- 336

  Fly   121 PVVVLAN----VRARA 132
            |.:::||    .|:||
  Fly   337 PTILVANKIDLARSRA 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kappaB-RasNP_610278.1 Ras_like_GTPase 13..174 CDD:206648 34/144 (24%)
Rgk3NP_001286670.1 P-loop containing Nucleoside Triphosphate Hydrolases 235..>396 CDD:476819 35/146 (24%)

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