DRSC/TRiP Functional Genomics Resources

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Protein Alignment Br140 and SDG16

DIOPT Version :10

Sequence 1:NP_610266.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_194520.3 Gene:SDG16 / 828904 AraportID:AT4G27910 Length:1027 Species:Arabidopsis thaliana


Alignment Length:476 Identity:121/476 - (25%)
Similarity:189/476 - (39%) Gaps:112/476 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 CCICLDGECQNTNVILFCDMCNLAVHQDCYGVPYIPE-GQWLCRRCLQSPSKPVNCVLCPNAGGA 349
            |.:|...|..:.|.|:.|:.|.:||||:|||..::.: ..|:|:.| :.|.....|.|||..|||
plant   595 CAVCRWVEDWDYNKIIICNRCQIAVHQECYGARHVRDFTSWVCKAC-ERPDIKRECCLCPVKGGA 658

  Fly   350 FKQTD-HGQWAHVVCALWIPEVRFANTVFLEPIDSIETIPPARWRLTCYVCKEKGLGACIQCHRN 413
            .|.|| ...|.||.||.:.|||.||:...:||...|.:||...:...|.:||:.. |:|.||.:.
plant   659 LKPTDVETLWVHVTCAWFQPEVCFASEEKMEPAVGILSIPSTNFVKICVICKQIH-GSCTQCCKC 722

  Fly   414 SCYAAFHVTCAQQAGLYMTMDTV-KDGHNDSSMHVQKFAYCHAHTPADAKLKMNVPDFEDTRHKM 477
            |.|  :|..||.:||..|.:..: |:|...:.| |...||..|..| |..|.:..|....:...:
plant   723 STY--YHAMCASRAGYRMELHCLEKNGQQITKM-VSYCAYHRAPNP-DNVLIIQTPSGAFSAKSL 783

  Fly   478 KEARK-------ALAKKRSTAPVVLIPTIPPDRVQEIATMVTMQR---KKEFLDRIIAYWTL-KR 531
            .:.:|       :|.::...||..  .||..|........|..::   ||...:..|.:.|. .|
plant   784 VQNKKKGGSRLISLIREDDEAPAE--NTITCDPFSAARCRVFKRKINSKKRIEEEAIPHHTRGPR 846

  Fly   532 HYRNG----------VP-----------LLRRLQSQGNNHGVIQRNGIEGSPDTGELYRQLKYWQ 575
            |:.:.          ||           .|..||....:.....|:||.|             |.
plant   847 HHASAAIQTLNTFRHVPEEPKSFSSFRERLHHLQRTEMDRVCFGRSGIHG-------------WG 898

  Fly   576 CL-RQDLERARLLCELVRKREKLKVAFVR---------------ISEEVVMLQLNPLEAALNKLL 624
            .. |::::...::.|...::.:..:|.:|               ||||||               
plant   899 LFARRNIQEGEMVLEYRGEQVRGSIADLREARYRRVGKDCYLFKISEEVV--------------- 948

  Fly   625 DALEARDSMQIFREPVDTSEVPD-YTDIVKQPMDLGTMRAKL-----------KECQYNSL---- 673
              ::|.|...|.| .::.|..|: |..|    |.:|...:::           :|..|:.|    
plant   949 --VDATDKGNIAR-LINHSCTPNCYARI----MSVGDEESRIVLIAKANVAVGEELTYDYLFDPD 1006

  Fly   674 --EQLEADFDLMIQNCLAYNN 692
              |:|:........||..:.|
plant  1007 EAEELKVPCLCKAPNCRKFMN 1027

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_610266.1 SFP1 <22..61 CDD:227516
COG5141 203..>625 CDD:227470 103/389 (26%)
Bromo_brd1_like 615..712 CDD:99944 18/96 (19%)
MSCRAMM_ClfA <1080..1163 CDD:468110
PWWP_BRPF 1303..1414 CDD:438964
SDG16NP_194520.3 PWWP_AtATX3-like 206..310 CDD:438971
PHD_SF 401..451 CDD:473978
PHD_ATX3_4_5_like 594..640 CDD:276970 16/44 (36%)
ePHD_ATX3_4_5_like 649..760 CDD:277133 45/114 (39%)
SET_SETD1-like 872..1023 CDD:380916 34/185 (18%)
Blue background indicates that the domain is not in the aligned region.

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