DRSC/TRiP Functional Genomics Resources

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Protein Alignment Br140 and brd1

DIOPT Version :10

Sequence 1:NP_610266.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_001073031.1 Gene:brd1 / 733743 XenbaseID:XB-GENE-949377 Length:1185 Species:Xenopus tropicalis


Alignment Length:1415 Identity:486/1415 - (34%)
Similarity:679/1415 - (47%) Gaps:333/1415 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 SAGGGSASGVSARQYANPESLVSYNEEEATVTFNLDGKSVRLGIDDALPLVEDEEFAALVARGCI 165
            ||...|.|..|.:.....|:| :|.:.:..|...::|:..|:.|.|.|.:|.:::..|.....|.
 Frog    11 SAPRSSTSPCSIKHSPTRETL-TYAQAQRMVEIEIEGRLHRISIFDPLEIVSEDDLTAQEINECN 74

  Fly   166 L---NADAPP----------------LEENAPWARVQVPVARVAEIPDYRVSD-----APPRPLA 206
            .   |::.||                ..|..|.|......:.:.| |..||.:     ||.|..:
 Frog    75 SNKENSEQPPQVCLRSKRHKASKEKKKSEVLPTAHGHTTTSVLPE-PKVRVIECSPPSAPNRSPS 138

  Fly   207 YYRFIEKSLEELDGEVEYDVDEEDSAWLEHMNEERQRLGLNAVGIDTMELLMDRLEKESHFQAAA 271
            ||:|.:||.||||.|||||:||||.||||.:||:|:..|.:||..|..|.||||.||||:.:...
 Frog   139 YYKFQDKSPEELDKEVEYDMDEEDYAWLEIINEKRKSEGFSAVSQDIFEFLMDRFEKESYCENQK 203

  Fly   272 NGTPTGVEVDDDAVCCICLDGECQNTNVILFCDMCNLAVHQDCYGVPYIPEGQWLCRRCLQSPSK 336
            .|....: :|:|||||||:||||||:|||||||||||||||:|||||||||||||||.||||.:.
 Frog   204 QGDQQSL-IDEDAVCCICMDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRNI 267

  Fly   337 PVNCVLCPNAGGAFKQTDHGQWAHVVCALWIPEVRFANTVFLEPIDSIETIPPARWRLTCYVCKE 401
            |::||||||.|||||:||..:|.|||||||||||.||||||:||||.:..||||||:||||:||:
 Frog   268 PIDCVLCPNKGGAFKKTDDDRWGHVVCALWIPEVGFANTVFIEPIDGVRNIPPARWKLTCYLCKQ 332

  Fly   402 KGLGACIQCHRNSCYAAFHVTCAQQAGLYMTMDTVKD-GHNDSSMHVQKFAYCHAHTPADAKLK- 464
            ||:|||||||:.:||.||||||||:|||||.|:.||: ..:.::..|:|.|||.||||.....: 
 Frog   333 KGVGACIQCHKANCYTAFHVTCAQKAGLYMKMEPVKEVAGSITTFSVKKTAYCDAHTPPGCVRRP 397

  Fly   465 -------------------MNVPDFEDTRHKMKEARKALAKKRSTAPVVLIPTIPPDRVQEIATM 510
                               .|:......|.|..:|:|.|.:..:..|.:.:|.|||.||.:|...
 Frog   398 LNIYEEPESKNGICRKSSDKNIRSTSKARRKTTKAKKELNETCNVLPTITVPDIPPQRVNKIINQ 462

  Fly   511 VTMQRKKEFLDRIIAYWTLKRHYRNGVPLLRRLQSQGNNHGVIQRNGIEGSPDTGE---LYRQLK 572
            |::.|||:|::|:.:||.|||..|||:||||||||...:    ||| |:.|.|..|   |.::||
 Frog   463 VSIPRKKQFIERVHSYWMLKRLSRNGIPLLRRLQSSLQS----QRN-IQESEDDEEVQALKKKLK 522

  Fly   573 YWQCLRQDLERARLLCELVRKREKLKVAFVRISEEVVMLQLNPLEAALNKLLDALEARDSMQIFR 637
            |.|.||.||||||||.||:|||||||...|::.:..:.|:|.||...|..||:.|:.:|..:||.
 Frog   523 YLQRLRHDLERARLLIELIRKREKLKREQVKVEQVAMELKLTPLTVLLRSLLEQLQEKDPARIFA 587

  Fly   638 EPVDTSEVPDYTDIVKQPMDLGTMRAKLKECQYNSLEQLEADFDLMIQNCLAYNNKDTVFYRAGI 702
            .||:.:|||||.|.:|.|||..||:.:|::.:|.:|.:.|.||:|:|:||:.||.|||:||||.:
 Frog   588 HPVNLTEVPDYLDHIKHPMDFSTMKKRLEDQRYRNLNEFEEDFNLIIENCMKYNAKDTIFYRAAV 652

  Fly   703 RMRDQAAPLFVQVRKEL----------------------------QRDGLLARSQRYHVDHVEAE 739
            |:||....|..|.|:|.                            ..|.||..:.|.|:     .
 Frog   653 RLRDHGGVLLRQARREANVIGFDEETGMHLPEQPKIEAPPQFSWEDVDKLLNPNNRAHM-----A 712

  Fly   740 VEQELRLLLAAPASEGIVQKLLILADKSQVLKNPTYRTKKIKQIRLEISRMRKSLQKARFAARHS 804
            :|::|:.||         :||    |.:..:|:...|:|::|.::.||:.:|:.|.:        
 Frog   713 LEEQLKELL---------EKL----DLTFAMKSSGSRSKRLKLLKREIANVRQMLSQ-------- 756

  Fly   805 SHANQSQSDDEDTLGGSPSKKRTRKRFNSSGVDMELGHDDDDEEEDSDEDSMGEDTVSKDLLNST 869
            .|....|.  |..:|.          |...|..:..|.::.|:.....|.|......|....|| 
 Frog   757 QHVQPPQI--ESGIGS----------FEEDGSMLNDGEEEGDKSPPKLEPSDALPLPSNSETNS- 808

  Fly   870 QTPPCSPIKSLNNSSSPVGINRRTAILLTRKAQAALKRPSEPLTTPVKEEQHNSQSSNTQSTSGS 934
            :.|...||: ||...|              |....:...:|..:|.::.|..|..          
 Frog   809 EPPTLKPIE-LNPEQS--------------KLYKRVTFDNELHSTTIQNEMINGH---------- 848

  Fly   935 SSSVTTAATAASSGAGTLNHVLSSAPPTASSFALTQNNSSGGGALASGTGIGGSSSAGTAAAASL 999
                            |..::|..:         ..|.||......|.|.:...:|.....:.|:
 Frog   849 ----------------TPENLLKDS---------NLNESSDSEVAESSTDVNRRTSILFRKSKSV 888

  Fly  1000 TSTALAMNSKLSANLPVKSPKRPGRYRRVPEVRHSSSMSPKKSPNPAVTVSQALPMPETLPFERI 1064
                              ||::|.:.      ..:...||:......::|  .||..|||...| 
 Frog   889 ------------------SPQKPSKN------TETQPTSPQLGTKTFLSV--VLPRLETLLQPR- 926

  Fly  1065 PDSFRVYRANNQRDVSDSDDAPSQSSSPCSSCSDFSMSGSCSDFDSDEASEGDADGDPDRDGGRS 1129
                                  .:|.|.|                          ||.:.||   
 Frog   927 ----------------------KRSRSTC--------------------------GDSEVDG--- 940

  Fly  1130 RSEERDSTSQEGTTDAMDMQHASLNNVQGNNGNMAISSSSGGSGGSSSEDDELEERPLSARQNKP 1194
                      |.....:|                     :|.|.|....:.|.|......|:.:|
 Frog   941 ----------ESPVKRLD---------------------TGLSNGYGEGEKEKEFNITPGRKLEP 974

  Fly  1195 MKVGTRGTPTPTTMARAVALSAGRGRGKRRSNLSESTSSTATPP-PLRRAGKLRSATPNASPLVN 1258
                                   |.|....|::|.:.|....|. .|.:.||.:.|.        
 Frog   975 -----------------------RRRCASESSISSNNSILCNPSFGLPKCGKGKPAL-------- 1008

  Fly  1259 NIKARRNTTAAGS---APLTNNNRSKHSEDSASSERHNNHSHGQKPA-LEPLQLVWAKCRGYPWY 1319
               .||:|....|   :.:.|.|.::.:..:|...:.|........| ||||::|||||.|||.|
 Frog  1009 ---IRRHTIEDRSELISCIENGNYARAARIAAEVGQTNMWVAASTSAFLEPLKVVWAKCSGYPSY 1070

  Fly  1320 PALILDPKTPK-GFVYNGVPLPAPPTDVLAL---RKNCLDEIVFLVLFFDVKRTWQWLPANKLDI 1380
            ||||:|||.|: |..:|||.:|.||.|||..   .:...:|.:|||||||.||:|||||.:|:..
 Frog  1071 PALIIDPKMPRVGCHHNGVAIPVPPMDVLKTGDQMQTRAEEKLFLVLFFDNKRSWQWLPKSKMVP 1135

  Fly  1381 LGIDKQLDQQKLVESRKPAERKAVKKAYQDALHYQSQV--------SDLE 1422
            ||:|:.:|:.|::|.|..:.||||:.||..||::.|:|        ||::
 Frog  1136 LGVDETIDKLKMMEGRNSSIRKAVRVAYDRALNHLSRVQGESVSDFSDID 1185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_610266.1 SFP1 <22..61 CDD:227516
COG5141 203..>625 CDD:227470 246/445 (55%)
Bromo_brd1_like 615..712 CDD:99944 45/96 (47%)
MSCRAMM_ClfA <1080..1163 CDD:468110 9/82 (11%)
PWWP_BRPF 1303..1414 CDD:438964 62/114 (54%)
brd1NP_001073031.1 EPL1 47..196 CDD:463128 55/149 (37%)
COG5141 139..>571 CDD:227470 243/437 (56%)
Bromo_brd1_like 565..662 CDD:99944 45/96 (47%)
PWWP_BRPF2 1054..1173 CDD:438985 63/118 (53%)
Blue background indicates that the domain is not in the aligned region.

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