DRSC/TRiP Functional Genomics Resources

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Protein Alignment Br140 and jade2

DIOPT Version :10

Sequence 1:NP_610266.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:XP_697831.5 Gene:jade2 / 569359 ZFINID:ZDB-GENE-120215-66 Length:795 Species:Danio rerio


Alignment Length:874 Identity:232/874 - (26%)
Similarity:371/874 - (42%) Gaps:204/874 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 SARQYANPESLVSYNEEEATVTFNLDGKSVRLGIDDALPLVEDEEFAALVARGCILNADAPPLEE 175
            |::......:.|.:.::..:..|..|..:. :.:.|:..|..||.:..     |           
Zfish    30 SSKNTGTSSTWVRHEQKRPSEVFRTDFITA-MKLPDSAQLSADEFYIL-----C----------- 77

  Fly   176 NAPWAR-----VQVPVARVAEIPDYRVSDAPP-RPLAYYRFIE-KSLEELDGEV-EYDVDEEDSA 232
             .||.:     |||| |.|..||:..|...|. ..:.::..:: :|..|:...: .||:|:.|.|
Zfish    78 -DPWRQEWEKGVQVP-ANVETIPEPVVRMLPEVSRIPFFSAVQTRSQSEISEPLSRYDLDDLDVA 140

  Fly   233 WLEHMNEERQRLGLNAVGIDTMELLMDRLEK---ESHFQAAANGTPTGVEVDDDAVCCICLDGEC 294
            |||.:|.|.::|.|..:...|||.|:..||:   ::..|...|....|:|.|:|.||.:|...|.
Zfish   141 WLELVNAEFRQLALPELDELTMEQLLVELERRCQQNMQQQIENQEGLGIEYDEDVVCDVCRSPEG 205

  Fly   295 QNTNVILFCDMCNLAVHQDCYGVPYIPEGQWLCRRC---LQSPSKPVNCVLCPNAGGAFKQTDHG 356
            ::.|.::|||.||:.|||.|||:..:|:|.||||.|   :||     .|:|||..|||.|.|..|
Zfish   206 EDGNEMVFCDNCNVCVHQACYGILKVPQGNWLCRTCALGVQS-----KCLLCPRRGGALKPTRSG 265

  Fly   357 -QWAHVVCALWIPEVRFANTVFLEPIDSIETIPPARWRLTCYVCKEKGLGACIQCHRNSCYAAFH 420
             :|.||.||||||||.......:|||..:..||.:||.|:|.:|.|.. |.||||...||..|||
Zfish   266 TKWVHVSCALWIPEVSIGCPEKMEPITKVSHIPASRWALSCSLCCEHS-GTCIQCSMPSCTVAFH 329

  Fly   421 VTCAQQAGLYMTMDTVKDGHNDSSMHVQKFAYCHAHTP-----ADAKLKMNVPDFEDTRH----- 475
            ||||...||.| ..|:.|  ||   .|:..:||..|:.     :...::.:.|   |.||     
Zfish   330 VTCAFDHGLEM-RTTLAD--ND---EVRFKSYCLEHSSVWRSNSSGGVQSDRP---DPRHAVPDP 385

  Fly   476 ----KMKEARKALAKKRSTAPVVLIPTIPPDRVQEIA----TMVTMQRKKEFL-------DRIIA 525
                |.::|.:..|.:|.            .::||:.    |:|..:...|.|       |.:..
Zfish   386 AAAQKQEQAEREKASQRK------------QKLQELEDEFYTLVDPKDIAESLSLPDAHVDFLFQ 438

  Fly   526 YWTLKRHYRNGVPLLRRLQSQGNNHGVIQRNGIEGSPDTGELYRQLKYWQCLRQDLERARLLCEL 590
            ||.|:|......||:...:.:.:|  :.|:       :...|||:||.:..|||||||.|.||.:
Zfish   439 YWKLRRKTNGNKPLVSMKRDEVDN--LAQQ-------EQDVLYRRLKLFTHLRQDLERVRNLCCM 494

  Fly   591 VRKREKLKVAFVRISEEVVMLQLNPLEAALNKLLDALEARDSMQIFREPVDTSEVPDYTDIVKQP 655
            :.:|||:|.:...:.|::..||:..:|                               .::|.:.
Zfish   495 ITRREKIKHSLCNLQEKIFSLQIQLME-------------------------------QNLVGEK 528

  Fly   656 MDLG------TMRAKLKECQYNSLEQLEADFDLMIQNCLAYNNKDTVFYRAGIRMRDQAAPLFVQ 714
            ...|      .::.::||.:.||.|:                 ||        :.|.....||.|
Zfish   529 SQRGERKHRNRVQERVKERRKNSPEK-----------------KD--------KWRSDDNSLFSQ 568

  Fly   715 V--RKELQRDGLLARSQRYHVDHVEAEVEQELRLLLAAPASEGIVQKLLILADKSQVLKNPTYRT 777
            :  .:....||.|..|.:....|:.|| ....|..|:|...|   ....:|:|  |:|:.    .
Zfish   569 LGFSRSFPIDGSLFDSWQAQSIHISAE-SMLSRWSLSAGTPE---TSASLLSD--QLLRG----E 623

  Fly   778 KKIKQIRLEISRMRKSLQKARFAARHSSHANQSQSDDEDTLGGSPSKKR---TRKRFNSSGVDME 839
            :.:..:.:: |.|:.:.:..|...:|...|.:|:   ..||...|:|.:   |.:|       ..
Zfish   624 ESLLSLMMD-SSMQNTWKTPRLGRKHPKSAPRSR---RKTLCSPPAKGKVCVTERR-------CR 677

  Fly   840 LGHDDDDEEEDSDEDSMGEDTVSKDLLNSTQTPPCSPIKSLNNSSSPVGINRRTAILLTRKAQAA 904
            .|...:|.:..||                .::.|..|..:..:|..   |:.....:|.:::|.:
Zfish   678 RGEKTEDFQRSSD----------------GRSDPLQPAIAKMDSCH---ISEERDSVLEKRSQKS 723

  Fly   905 LKR--PSEPLTTPVKEEQHNSQSSNTQST 931
            ::.  |.:..|....:...:|..|||..|
Zfish   724 VRMHLPRQSKTRCKSQTVESSVQSNTPDT 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_610266.1 SFP1 <22..61 CDD:227516
COG5141 203..>625 CDD:227470 154/455 (34%)
Bromo_brd1_like 615..712 CDD:99944 11/102 (11%)
MSCRAMM_ClfA <1080..1163 CDD:468110
PWWP_BRPF 1303..1414 CDD:438964
jade2XP_697831.5 COG5141 107..>515 CDD:227470 151/443 (34%)
ePHD_JADE2 249..359 CDD:277175 56/116 (48%)
Blue background indicates that the domain is not in the aligned region.

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