DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Br140 and Jade3

DIOPT Version :10

Sequence 1:NP_610266.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_001393168.1 Gene:Jade3 / 382207 MGIID:2148019 Length:850 Species:Mus musculus


Alignment Length:1106 Identity:266/1106 - (24%)
Similarity:402/1106 - (36%) Gaps:366/1106 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 SASGVSARQYANPESLVSYNE---EEATVTFNLDGKSVRLGID-DALPLVEDEEFAALVARGCIL 166
            ||..:....:.||:|...:.:   ||..       |.|::..: |::|.      .:|.:|...|
Mouse    51 SAMKIPDSHHVNPDSYYLFTDTWKEEWE-------KGVQVPANPDSVPT------PSLRSRNRTL 102

  Fly   167 NADAPPLEENAPWARVQVPVARVAEIPDYRVSDAP------PRPLAYYR----------FIEKSL 215
            .....|...:.|          |.::|..|:....      .||..|.|          :| .:|
Mouse   103 PTPQKPFFCSLP----------VTDLPHRRIISEKVKEMLFVRPRKYIRCSSPESAEPGYI-NTL 156

  Fly   216 EELDGEVEYDVDEEDSAWLEHMNEERQRLGLNAVGIDTMELLMDRLEKESH---FQAAANGTPTG 277
            |:......||:|:.|..||:.:||:...:|...:....||..::.||:..|   ..|.......|
Mouse   157 EQAASTCRYDLDDMDIFWLQELNEDLGEMGYGPIDETLMEKTIEVLERHCHENMNHAIETVEGLG 221

  Fly   278 VEVDDDAVCCICLDGECQNTNVILFCDMCNLAVHQDCYGVPYIPEGQWLCRRCLQS--PSKPVNC 340
            :|.|:|.:|.:|...:.:..|.::|||.||:.|||.|||:..||||.||||.|:..  |    .|
Mouse   222 IEYDEDVICDVCRSPDSEEGNDMVFCDKCNVCVHQACYGILKIPEGSWLCRSCVLGIYP----QC 282

  Fly   341 VLCPNAGGAFKQTDHG-QWAHVVCALWIPEVRFANTVFLEPIDSIETIPPARWRLTCYVCKEKGL 404
            ||||..|||.|.|..| :||||.||||||||..|....:||:..|..|||:||.|.|.:||.| .
Mouse   283 VLCPKKGGAMKTTRTGTKWAHVSCALWIPEVSIACPERMEPVTKISHIPPSRWALVCNLCKLK-T 346

  Fly   405 GACIQCHRNSCYAAFHVTCAQQAGLYMTMDTVKDGHNDSSMHVQKFAYCHAHTPADAKLKMNVPD 469
            ||||||...||..|||||||.:.||  .|.|:.|..::    |:..::|..|:....||    .|
Mouse   347 GACIQCSVKSCITAFHVTCAFEHGL--EMKTILDEGDE----VKFKSFCLKHSQNKPKL----GD 401

  Fly   470 FEDTRHKMKEARKALAKKRSTAPVVLIPTIPPDRVQEIATMVTMQ---RKKEF----LDRIIAYW 527
            .|...|::.|..:|.::|.|.....|     .:..:|..|:|.::   ::.|.    :|.|..||
Mouse   402 AEYHHHRVAEQSQAKSEKTSLRAQKL-----RELEEEFYTLVQVEDVAKEMELSAFTVDFIYNYW 461

  Fly   528 TLKRHYRNGVPLLRRLQSQGNNHGVIQRNGIEGSPDTGELYRQLKYWQCLRQDLERARLLCELVR 592
            .|||......||:...:.:.|  |::|       |....::.:::.:..|||||||.|.||.::.
Mouse   462 KLKRKSNFNKPLIPPKEEEEN--GLVQ-------PKEESIHTRMRMFMHLRQDLERVRNLCYMIS 517

  Fly   593 KREKLKVAFVRISEEVVMLQLNPLEAALNKLLDALEARDSMQIFREPVDTSEVPDYTDIVKQPMD 657
            :|||||::..::.|::..||                    :|:..|.:...              
Mouse   518 RREKLKLSHTKVQEQIFGLQ--------------------VQLINEEITEG-------------- 548

  Fly   658 LGTMRAKLKECQYNSLEQLEADFDLMIQNCLAYNNKDTVFYRAGIRMRDQAAPLFVQVRKELQRD 722
                                    |.:.|.|    ::::||                        
Mouse   549 ------------------------LSLTNAL----ENSLFY------------------------ 561

  Fly   723 GLLARSQRYHVDHVEAEVEQELRLLLAAPASEGIVQKLLILADKSQVLKNPTYRTKKIKQIRLEI 787
                                                             .|...|.|:|      
Mouse   562 -------------------------------------------------PPPRITLKLK------ 571

  Fly   788 SRMRKSLQKARFAARHSSHANQSQSDDEDTLGGSPSKKRTRKRFNSSGVDMELGHDDDDEEEDSD 852
              |.||                                                         :.
Mouse   572 --MPKS---------------------------------------------------------TS 577

  Fly   853 EDSMGEDTVSKDLLNSTQTPPCSPIKSLNNSSSPVGINRRTAILLTRKAQAALKRPSEPLTTPVK 917
            ||       .||....|:....||     .|||| |.::|:.           :.|.|||...||
Mouse   578 ED-------CKDSSTETEHQLSSP-----GSSSP-GHSKRSP-----------QMPEEPLDMNVK 618

  Fly   918 -------EEQHNS-QSSNTQS-TSGSSSSVTTAATAASSGAGTLNHVLSSAPPTASSFALTQNNS 973
                   |.:.|. |:|.:.| ....|||.|..|.:|.     ..|..|...|.|...||....|
Mouse   619 IYPRYPLESKSNCLQTSRSHSRCETKSSSPTPRAPSAE-----FYHGQSLGKPLALQAALHGQVS 678

  Fly   974 SGGG------ALASGTGIGGSSSAGTAAAASLTSTALAMNSKLSANLPVKSPKRPGRYRRVPEVR 1032
            .|.|      .::|..|:.|:.|.......:.:.......|.||::||     .||..|: ..:.
Mouse   679 IGNGKNQPNSRVSSSNGLEGNWSGNITQKVNSSEVCYDQESMLSSHLP-----SPGNIRK-SSME 737

  Fly  1033 HSSSMSPKKSPNPAVTVSQALPMPETLPFERIPDSFRVYRANNQRDVSDSDDAPSQS--SSPCSS 1095
            | .|.|.|::.|..|..::.|.                |.....::||..:....:.  ..|...
Mouse   738 H-FSRSFKEATNTWVKPTEDLQ----------------YCVKPTKNVSSKEQLWGRQLLRRPTGR 785

  Fly  1096 CSDFSMSGSCSDFDSDEASEGDADGDPDRDGGRSR--SEERDSTSQE------GTTDAMDMQHAS 1152
            .|.....|.|.|.   |.|:.:|:|:..::..|.:  |.:|::.|.:      |.|......|:|
Mouse   786 ASYQETDGYCPDL---EPSDSEAEGEGSKETPRVKRESSDRENPSHDSARECHGKTKTHPHSHSS 847

  Fly  1153 L 1153
            :
Mouse   848 M 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_610266.1 SFP1 <22..61 CDD:227516
COG5141 203..>625 CDD:227470 155/444 (35%)
Bromo_brd1_like 615..712 CDD:99944 7/96 (7%)
MSCRAMM_ClfA <1080..1163 CDD:468110 18/84 (21%)
PWWP_BRPF 1303..1414 CDD:438964
Jade3NP_001393168.1 EPL1 <74..204 CDD:463128 33/153 (22%)
COG5141 165..>536 CDD:227470 146/399 (37%)
PHD_SF 282..392 CDD:473978 59/116 (51%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.