DRSC/TRiP Functional Genomics Resources

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Protein Alignment Br140 and Jade3

DIOPT Version :10

Sequence 1:NP_610266.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:XP_038955504.1 Gene:Jade3 / 299305 RGDID:1563945 Length:850 Species:Rattus norvegicus


Alignment Length:1154 Identity:270/1154 - (23%)
Similarity:408/1154 - (35%) Gaps:407/1154 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 AEARNGCSSASAGGG-------------------------SASGVSARQYANPESLVSYNE---E 127
            :|:.:.|.|.|...|                         ||..:....:.||:|...:.:   |
  Rat    11 SESSDECPSTSFTSGSMYRKKSKNPKEHKKSAEVFRKDLISAMKIPDSHHINPDSYYLFTDTWKE 75

  Fly   128 EATVTFNLDGKSVRLGID-DALPLVEDEEFAALVARGCILNADAPPLEENAPWARVQVPVARVAE 191
            |..       |.|::..: |::|.      .:|.:|...|.....|...:.|          |.:
  Rat    76 EWE-------KGVQVPANPDSVPT------PSLRSRNRTLPTPQKPFFCSLP----------VTD 117

  Fly   192 IPDYRVSDAP------PRPLAYYR----------FIEKSLEELDGEVEYDVDEEDSAWLEHMNEE 240
            :|..|:....      .||..|.|          :| .:||.......||:|:.|..||:.:||:
  Rat   118 LPHRRIISEKVKEILFVRPRKYIRCSSPESAEPGYI-NTLELAASTCRYDLDDMDIFWLQELNED 181

  Fly   241 RQRLGLNAVGIDTMELLMDRLEKESH---FQAAANGTPTGVEVDDDAVCCICLDGECQNTNVILF 302
            ...:|...:....||..::.||:..|   ..|.......|:|.|:|.:|.:|...:.:..|.::|
  Rat   182 LGEMGYGPIDETLMEKTIEVLERHCHENMNHAIETVEGLGIEYDEDVICDVCRSPDSEEGNDMVF 246

  Fly   303 CDMCNLAVHQDCYGVPYIPEGQWLCRRCLQS--PSKPVNCVLCPNAGGAFKQTDHG-QWAHVVCA 364
            ||.||:.|||.|||:..||||.||||.|:..  |    .|||||..|||.|.|..| :||||.||
  Rat   247 CDKCNVCVHQACYGILKIPEGSWLCRSCVLGIYP----QCVLCPKKGGAMKTTRTGTKWAHVSCA 307

  Fly   365 LWIPEVRFANTVFLEPIDSIETIPPARWRLTCYVCKEKGLGACIQCHRNSCYAAFHVTCAQQAGL 429
            ||||||..|....:||:..|..|||:||.|.|.:||.| .||||||...||..|||||||.:.||
  Rat   308 LWIPEVSIACPERMEPVTKISHIPPSRWALVCNLCKLK-TGACIQCSVKSCITAFHVTCAFEHGL 371

  Fly   430 YMTMDTVKDGHNDSSMHVQKFAYCHAHTPADAKLKMNVPDFEDTRHKMKEARKALAKKRSTAPVV 494
              .|.|:.|..::    |:..::|..|:....||    .|.|...|:..|..:|.::|.|.....
  Rat   372 --EMKTILDEGDE----VKFKSFCLKHSQNKPKL----GDAEYHHHRAAEQSQAKSEKTSLRAQK 426

  Fly   495 LIPTIPPDRVQEIATMVTMQR-KKEF------LDRIIAYWTLKRHYRNGVPLLRRLQSQGNNHGV 552
            |     .:..:|..|:|.::. .||.      :|.|..||.|||......||:...:.:.|  |:
  Rat   427 L-----RELEEEFYTLVQVEDVAKEMGLSAFTVDFIYNYWKLKRKSNFNKPLIPPKEDEQN--GL 484

  Fly   553 IQRNGIEGSPDTGELYRQLKYWQCLRQDLERARLLCELVRKREKLKVAFVRISEEVVMLQLNPLE 617
            :|       |....::.:::.:..|||||||.|.||.::.:|||||::..::.|::..||     
  Rat   485 VQ-------PKEESIHTRMRMFMHLRQDLERVRNLCYMISRREKLKLSHTKVQEQIFGLQ----- 537

  Fly   618 AALNKLLDALEARDSMQIFREPVDTSEVPDYTDIVKQPMDLGTMRAKLKECQYNSLEQLEADFDL 682
                           :|:..|.:        ||                              .|
  Rat   538 ---------------VQLINEEI--------TD------------------------------GL 549

  Fly   683 MIQNCLAYNNKDTVFYRAGIRMRDQAAPLFVQVRKELQRDGLLARSQRYHVDHVEAEVEQELRLL 747
            .:.|.|    ::::||                                                 
  Rat   550 SLTNAL----ENSLFY------------------------------------------------- 561

  Fly   748 LAAPASEGIVQKLLILADKSQVLKNPTYRTKKIKQIRLEISRMRKSLQKARFAARHSSHANQSQS 812
                                    .|...|.|:|        |.||                   
  Rat   562 ------------------------PPPRITLKLK--------MPKS------------------- 575

  Fly   813 DDEDTLGGSPSKKRTRKRFNSSGVDMELGHDDDDEEEDSDEDSMGEDTVSKDLLNSTQTPPCSPI 877
                                                  :.||       .:|....|:..|.|| 
  Rat   576 --------------------------------------TSED-------CRDSSTETEHQPSSP- 594

  Fly   878 KSLNNSSSPVGINRRTAILLTRKAQAALKRPSEPLTTPVK-------EEQHN---SQSSNTQSTS 932
                .||||            ..::.:.:.|.|||...||       |.:.|   :..|::||.:
  Rat   595 ----GSSSP------------SHSKRSPEMPEEPLDMNVKIYPRYPLESKSNCVLASRSHSQSET 643

  Fly   933 GSSSSVTTAATAASSGAGTLNHVLSSAPPTASSFALTQNNSSGGG------ALASGTGIGGSSSA 991
            .|||....|.:|......||      ..|.|...||....|.|.|      .|||..|:.|:.|.
  Rat   644 RSSSPTQRAPSAEFYHGQTL------GKPLALQAALHGQASIGNGKNQPNSRLASSNGLEGNWSG 702

  Fly   992 GTAAAASLTSTALAMNSKLSANLPVKSPKRPGRYRRVPEVRHSS----SMSPKKSPNPAVTVSQA 1052
            ......:.........|.||::||...           .:|.|.    |.|.|::.|..|..::.
  Rat   703 NITQKVNSGEMCYDQESMLSSHLPSSG-----------NIRKSGMEHFSRSFKEATNTWVKPNED 756

  Fly  1053 L-----PMPETLPFERIPDSFRVYRANNQRDVSDSDDAPSQSSSPCSSCSDFSMSGSCSDFDSDE 1112
            |     |.......|::.....:.|:..:....::|                   |.|.|.   |
  Rat   757 LQYCVKPTKNVSSKEQLWGRPLLRRSTGRASYQETD-------------------GYCPDL---E 799

  Fly  1113 ASEGDADGDPDRDGGRSR--SEERDSTSQE------GTTDAMDMQHASL 1153
            .|:.:|:|:.:::..|.:  |.:|::.|.:      |.|......|:|:
  Rat   800 PSDSEAEGEGNKETVRVKRESSDRENPSHDSARECHGKTKTHPHSHSSM 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_610266.1 SFP1 <22..61 CDD:227516
COG5141 203..>625 CDD:227470 156/444 (35%)
Bromo_brd1_like 615..712 CDD:99944 9/96 (9%)
MSCRAMM_ClfA <1080..1163 CDD:468110 16/82 (20%)
PWWP_BRPF 1303..1414 CDD:438964
Jade3XP_038955504.1 EPL1 <74..204 CDD:463128 33/153 (22%)
COG5141 165..>536 CDD:227470 147/399 (37%)
PHD_SF 282..392 CDD:473978 59/116 (51%)
Blue background indicates that the domain is not in the aligned region.

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