DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Br140 and phf-14

DIOPT Version :10

Sequence 1:NP_610266.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_507508.2 Gene:phf-14 / 180169 WormBaseID:WBGene00013339 Length:599 Species:Caenorhabditis elegans


Alignment Length:486 Identity:126/486 - (25%)
Similarity:191/486 - (39%) Gaps:129/486 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 DEEDSAWLEHMNEERQRLGLNA-VGIDTM-----ELLMDRLEKESHFQAAANG-----TPTGVEV 280
            ||||..:..:..|...:.|..| .|.|:.     |...|....|...::|.:.     ||:   .
 Worm    40 DEEDDDFEVNPAENDAKTGSEADSGSDSQENSDEEESEDEENDEEEAESAESSEKPERTPS---A 101

  Fly   281 DDDAVCCICLDGECQN-TNVI-----LFCDMCNLAVHQDCYGVPYIPEG----QWLCRRCLQSPS 335
            :.|||.|    |.|.| .|::     |.|..|.:.||:.|||.  :|.|    .|.|..||...:
 Worm   102 EKDAVIC----GVCINQRNIVAAGDFLQCQKCGINVHESCYGT--LPGGSDDASWYCEPCLYGLT 160

  Fly   336 KPVNCVLCPNAGGAFKQTD-HGQWAHVVCALWIPEVRFANT-----VFLEPIDSIETIPPARW-R 393
            .|.:|..||:..||||:.| .|:|||.:|||:...|.:|.|     |..|.:|:     .|.: |
 Worm   161 LPPHCEFCPSRFGAFKRADIRGRWAHAICALYTHGVNYAQTHTRCGVSWEHLDN-----NAHFGR 220

  Fly   394 LTCYVCKEK---GLGACIQCHRNSCYAAFHVTCAQQAGLYMTMDTVKDGHNDSSMHVQKFAYCHA 455
            .||..|.:|   ..|...:|....|....||||||:.||  .:|...|  ||:.:.|.::.:|..
 Worm   221 RTCTACTDKIEARFGIASRCESGMCKEYLHVTCAQKLGL--LVDETDD--NDTEIAVMRYFFCKK 281

  Fly   456 HTPADAKLKMNVPDFED--------------------TRHKMKEARKALAKKRSTAPVVL---IP 497
            ||..| .||.....|:|                    .:::.||.::...|.|.....|:   ..
 Worm   282 HTNRD-NLKPYQRKFDDWEKSEARRITVNRRLRSGELEKNEQKEHKELRVKMREEIDKVIEEECK 345

  Fly   498 TIPP----------------------DRVQEIATMVTMQRKKEFLDRIIAYWTLKRHYRNGVPLL 540
            ..|.                      ||.:..|....:.| |||.|   .::.:|.:..:.||: 
 Worm   346 NKPKGDISAGEKPKQARLLNSSAEFFDRFETKAEEAGLSR-KEFRD---PFFNIKLNSGSHVPI- 405

  Fly   541 RRLQSQGNNHGVIQRNGIEGSPDTGELYRQLKYWQCLRQDLERAR----LLCELVRKREKLK--- 598
                  |.:...|.             :.|::..|.:.::.|:.|    ||.|....:||..   
 Worm   406 ------GFSKEYID-------------FMQIRDSQIIPEEEEKLRKSRELLAETKANQEKKSSQK 451

  Fly   599 --VAFVRISEEVVMLQLNPLEAALNKLLDAL 627
              |.....:||::..:|..:| .|::||..|
 Worm   452 HLVERFSANEELIEQKLTSIE-KLHQLLTEL 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_610266.1 SFP1 <22..61 CDD:227516
COG5141 203..>625 CDD:227470 124/482 (26%)
Bromo_brd1_like 615..712 CDD:99944 5/13 (38%)
MSCRAMM_ClfA <1080..1163 CDD:468110
PWWP_BRPF 1303..1414 CDD:438964
phf-14NP_507508.2 PHD1_PHF14 107..155 CDD:277036 17/53 (32%)
PHD_SF 165..282 CDD:473978 44/125 (35%)
PHD_SF 515..562 CDD:473978
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.