DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and Tsp47F

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster


Alignment Length:254 Identity:78/254 - (30%)
Similarity:113/254 - (44%) Gaps:64/254 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CATGTIKYSLFLFNALWAILGILVLIFGGLGWGAMPD-------------AYAIGILILGGTILV 54
            |....|||.||.||.|:||.|:.:||.|.:   .:.|             |..|.:::.|..|.:
  Fly     4 CGPSLIKYVLFAFNVLFAISGLGILIAGAV---VLADVNEFNHFVEGRVLAPPIVLIVTGLIIFL 65

  Fly    55 ISLFGCCGAVRESPRMLWTYASLLLILLLLIVAFIILNPKDVFKKYALQTVENQWELEQTKPGSM 119
            |:..||.||::|||.:|.|:|.||.::.::.:|..|  ...||||.....|:|..:....:..|.
  Fly    66 IASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGI--AASVFKKDLEGMVKNSLQESIKRSNSE 128

  Fly   120 DI-----IQKTYYCCGRDSAQDYLDIKFWNNTVPSSCCKD---DSCVNPLNLYVRGCLIKVEEAF 176
            |.     ||:...|||.||..|:..:.. |.|:|.|||:.   ||.|.       .||       
  Fly   129 DTMAWDNIQQKLMCCGVDSPADWRTLSA-NKTLPGSCCQPQYIDSTVG-------HCL------- 178

  Fly   177 ADEATTLG---YLEWGLLG-------FNAVIL-----------LLAIILAIHYTNRRRR 214
              |:..||   |.:.|.:|       .||:||           :|.|:||.:..|..|:
  Fly   179 --ESPALGKDKYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQ 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 45/139 (32%)
tetraspanin_LEL 94..178 CDD:239401 27/91 (30%)
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 75/243 (31%)
tetraspanin_LEL <134..205 CDD:351888 25/87 (29%)

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