DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and tspan10

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_001339579.3 Gene:tspan10 / 799194 ZFINID:ZDB-GENE-041111-201 Length:347 Species:Danio rerio


Alignment Length:246 Identity:52/246 - (21%)
Similarity:103/246 - (41%) Gaps:41/246 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VKLIVYALDVLCTLLALVLISFGIYVAVS------YNLNEIGQLTAYGYVGLGAAALLVVLWGYL 65
            :|.::.:.::|.|.|.|..:..|::..::      ..::.||......::.||....|:.:.|.:
Zfish    89 LKYLLISSNLLFTALGLATLVLGLWGLINKESFAQEKISGIGTDPMLLFLFLGLVLALLSMTGCI 153

  Fly    66 SAWRENVCCTVTFIIFLCLVIIAQ-FAVVYLLITQ---EKTVASNLANALEATWEEELNSPGAMS 126
            .|.|||:|....|...:.|:::|| .|.|.|...|   |..:...:..|: ..::::|:......
Zfish   154 GALRENMCLLRIFSAAVFLLVVAQVLAAVALFSMQAQMEDYLRLGMLTAI-VRYQDDLDLRFITD 217

  Fly   127 LYQNWFQCCGRGSPQDYIVNE------------RLPPETCF-----------------RNHDKSK 162
            ..|...||||..:.:|:.:|.            .:||..|.                 :..|:..
Zfish   218 EIQTSLQCCGADTYRDWEINVYYNCSAPGVQACGVPPSCCIDPLENGTVWNSQCGVGAQQLDEFS 282

  Fly   163 PENLIHT-GCRVEFENYWQHLTKIFNILALVLIGFELLLSVISCRLCNSIR 212
            .:::|.. ||......:.:|...:...:.:||:|.::|...|:.||.:.||
Zfish   283 AQSVIFLGGCLGSVARWMEHNGGVIVTVVIVLLGIQILTLFITARLLHKIR 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 50/241 (21%)
tspan10XP_001339579.3 None

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