DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and TSPAN6

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_003261.1 Gene:TSPAN6 / 7105 HGNCID:11858 Length:245 Species:Homo sapiens


Alignment Length:234 Identity:49/234 - (20%)
Similarity:100/234 - (42%) Gaps:42/234 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LIVYALDVLCTLLALVLISFGIYVAVSYN-----LNEIGQLTAYGYVGLGAAALLVVLWGYLSAW 68
            |::|..  :..:..::|::.||:..||..     |||......:..:..|...:|:..:|..:..
Human    21 LLIYTF--IFWITGVILLAVGIWGKVSLENYFSLLNEKATNVPFVLIATGTVIILLGTFGCFATC 83

  Fly    69 RENVCCTVTFIIFLCLVIIAQF--AVVYLLITQEKTVASNLANALEATWEEEL---NSPG----- 123
            |.:......:.:||.||.:.:.  |:|..:...|      :.|:.:..:|:.|   ||.|     
Human    84 RASAWMLKLYAMFLTLVFLVELVAAIVGFVFRHE------IKNSFKNNYEKALKQYNSTGDYRSH 142

  Fly   124 AMSLYQNWFQCCGRGSPQDY----IVNERLPPETCFRNHD---KSKPENLIHTGCRVEFENYWQH 181
            |:...||...|||....:|:    ..:|:..|::|.:..|   :...:.:.:.||.::.      
Human   143 AVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCKLEDCTPQRDADKVNNEGCFIKV------ 201

  Fly   182 LTKI---FNILALVLIG---FELLLSVISCRLCNSIRND 214
            :|.|   ..::|.:..|   |:|:...::..|..:|.|:
Human   202 MTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAITNN 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 47/227 (21%)
TSPAN6NP_003261.1 Tetraspanin 17..235 CDD:459767 47/227 (21%)
TM4SF2_6_like_LEL 112..209 CDD:239414 22/108 (20%)

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