DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ef and TSPAN8

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_004607.1 Gene:TSPAN8 / 7103 HGNCID:11855 Length:237 Species:Homo sapiens


Alignment Length:225 Identity:56/225 - (24%)
Similarity:102/225 - (45%) Gaps:28/225 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASTSS-VKLIVYALDVLCTLLALVLISFGIYVAVS------YNLNEIGQLTAYG---YVGLGAA 55
            ||..|: :|..::..:.|..|..:::::..|:|.||      :...::|..:...   .:.:||.
Human     1 MAGVSACIKYSMFTFNFLFWLCGILILALAIWVRVSNDSQAIFGSEDVGSSSYVAVDILIAVGAI 65

  Fly    56 ALLVVLWGYLSAWRENVCCTVTFIIFLCLVIIAQFAVVYLLITQEKTVASNLAN--------ALE 112
            .:::...|...|.:|:.|..:.|.|.|.|:::.|.| ..:|....|:.:..:.|        .|.
Human    66 IMILGFLGCCGAIKESRCMLLLFFIGLLLILLLQVA-TGILGAVFKSKSDRIVNETLYENTKLLS 129

  Fly   113 ATWEEELNSPGAMSLYQNWFQCCGR-GSPQDYIVNERLPPETCFRNHDKSKPENLIHTGCRVEFE 176
            ||.|.|.....|:.::|..|:|||. ....|:..|.:..||.| ...||.:|.. .:.|.:|..|
Human   130 ATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGNNFQHYPELC-ACLDKQRPCQ-SYNGKQVYKE 192

  Fly   177 NYWQHLTKIFNILA---LVLIGFELLLSVI 203
            ..   ::.|.:.||   :::||....|:||
Human   193 TC---ISFIKDFLAKNLIIVIGISFGLAVI 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 53/218 (24%)
TSPAN8NP_004607.1 Tetraspanin 8..232 CDD:459767 53/218 (24%)
hydrophobic region 10..33 3/22 (14%)
hydrophobic region 58..78 3/19 (16%)
hydrophobic region 83..109 8/26 (31%)
TM4SF3_like_LEL 106..206 CDD:239407 27/104 (26%)
hydrophobic region 206..232 5/14 (36%)

Return to query results.
Submit another query.