DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and Tspan2

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_081809.2 Gene:Tspan2 / 70747 MGIID:1917997 Length:221 Species:Mus musculus


Alignment Length:225 Identity:56/225 - (24%)
Similarity:100/225 - (44%) Gaps:37/225 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VKLIVYALDVLCTLLALVLISFGIYVAVSYNLNEIG---QLTAYGYVGL----GAAALLVVL--W 62
            :|.::...::|..|....:|:||::......:.::.   :...|.||||    ||.||::.:  :
Mouse    11 IKYLLLGFNLLFWLAGSAVIAFGLWFRFGGTMKDLSSEDKSPEYFYVGLYVLVGAGALMMTVGFF 75

  Fly    63 GYLSAWRENVCCTVTFIIFLCLVIIAQFAV-----VYLLITQE---KTVASNLANALEATWEEEL 119
            |...|.||:.|...:|  |.||::|  ||.     |:..|.::   :.|.|....|.....::..
Mouse    76 GCCGAMRESQCVLGSF--FTCLLVI--FAAEVTTGVFAFIGKDVAIRHVQSMYEEAYSDYLKDRA 136

  Fly   120 NSPGAMSLYQNWFQCCGRGSPQDYIVNERLPPETCFRNHDKSKPENLI-HTGCRVEFENYWQHLT 183
            ...|.:..:.:.|||||:.|      :|::.| ||        |:.|. |..|..:.|.......
Mouse   137 RGNGTLITFHSAFQCCGKES------SEQVQP-TC--------PKELPGHKNCIDKIETVISAKL 186

  Fly   184 KIFNILALVLIGFELLLSVISCRLCNSIRN 213
            ::..|:.:.:.|..:...:.|..||.:|||
Mouse   187 QLIGIVGIGIAGLTIFGMIFSMVLCCAIRN 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 52/219 (24%)
Tspan2NP_081809.2 Tetraspanin 11..212 CDD:459767 52/219 (24%)

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