DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and Tspan11

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_081019.1 Gene:Tspan11 / 68498 MGIID:1915748 Length:253 Species:Mus musculus


Alignment Length:212 Identity:48/212 - (22%)
Similarity:84/212 - (39%) Gaps:43/212 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LVLISFGIYVAVSYNLNEIGQLT-AYGYVGLGAAALLVVLWGYLSAWRENVCCTVTFIIFLCLVI 86
            |.:::...:.|.:|.|..:|.|. ..|::|.||..            ||...|..|:...|.::.
Mouse    49 LSILASSTFAASAYILIFVGGLVMTTGFLGFGAII------------REQKSCLSTYFCLLLVIF 101

  Fly    87 IAQFAVVYLLITQEKTVASNLANALEATWEEELNSPGAMSL------YQNWFQCCGRGSPQD--- 142
            :.:.....|.....:.::..|...|.:|..|....|.|..:      .|..|:|||..|..|   
Mouse   102 LVELVAGVLAHVYYQRLSDELKWHLNSTLTEHYGQPRAAEITASVDRLQQDFKCCGSNSSADWQH 166

  Fly   143 --YIVNE----RLPPETC-----FRNHDKSKPENL--IHTGCRVEFENY-WQHLTKIFNILALVL 193
              ||:::    |..|::|     .|...::.|.|:  :..||..:.|.: ..||.    ::..|.
Mouse   167 SAYILSQEALGRQVPDSCCKTVVARCGQRAHPSNIYKVEGGCMAKLEQFVADHLL----LMGAVG 227

  Fly   194 IG---FELLLSVISCRL 207
            ||   .::...|::|.|
Mouse   228 IGVACLQICGMVLTCCL 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 48/212 (23%)
Tspan11NP_081019.1 Tetraspanin 16..244 CDD:459767 47/210 (22%)
CD151_like_LEL 112..220 CDD:239408 24/107 (22%)

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