DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and Tspan13

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_079635.1 Gene:Tspan13 / 66109 MGIID:1913359 Length:204 Species:Mus musculus


Alignment Length:161 Identity:44/161 - (27%)
Similarity:74/161 - (45%) Gaps:22/161 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSVKLIVYALDVLCTLLALVLI---SFGIYVAVSYNLNEIGQLTAYGYVGLGAAALLVVLWGYLS 66
            |..|..:.||::|.||::|:||   ::||...:..:|..:|.:     :.:|....|:.|.|.:.
Mouse     7 SCSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVVGVV-----IAVGIFLFLIALVGLIG 66

  Fly    67 AWRENVCCTVTFIIFLCLVIIAQFAV--VYLLITQEKTVASNLANALEATWEEELNSPGAMSLYQ 129
            |.:.:......::|.|.||.|.||:|  ..|.:.:|:.     ...||..|.   |:..|.:..|
Mouse    67 AVKHHQVLLFFYMIILLLVFIVQFSVSCACLALNREQQ-----GQLLEVGWN---NTASARNDIQ 123

  Fly   130 NWFQCCGRGSPQDYIVNERLPPETCFRNHDK 160
            ....|||..|   |..|:.. |.:|.::..|
Mouse   124 RNLNCCGFRS---YNPNDTC-PASCAKSTQK 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 43/159 (27%)
Tspan13NP_079635.1 Tetraspanin <55..190 CDD:459767 29/108 (27%)

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