DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and cd81a

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_571593.2 Gene:cd81a / 58031 ZFINID:ZDB-GENE-000831-5 Length:236 Species:Danio rerio


Alignment Length:239 Identity:52/239 - (21%)
Similarity:102/239 - (42%) Gaps:44/239 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TSSVKLIVYALDVLCTLLALVLISFGIYVAVSYNLNEIGQL-------------TAYGYVGLGAA 55
            |..:|.:::..:.:..|...|::...:::......:.:..|             :.|..:.:||.
Zfish     9 TKCIKYMLFFFNFIFWLAGCVILGVSLWLRHDTKTSSLLDLKYEGTESPTTFYISVYILIAVGAV 73

  Fly    56 ALLVVLWGYLSAWRENVCCTVTFIIFLCLVIIAQFAV---VYLLITQEKTVASNLANALE----- 112
            .:.|...|...|.:|:.|...||  |.|||::....|   ::..:.::| ::..:....:     
Zfish    74 MMFVGFLGCYGAIQESQCLLGTF--FACLVLLFACEVAAGIWGFMNKDK-ISKEVIGFYDSVYDK 135

  Fly   113 -ATWEEELNSP--GAMSLYQNWFQCCGRGSPQDYIVNERLPPETCFRNHDKSKPENLIHTG--CR 172
             ||:..:..:|  ..:.::....||||:|:....|| :|...:||        ||:|....  |.
Zfish   136 GATYNTDNKNPATAVLKVFHETLQCCGKGNLFTAIV-DRWLTDTC--------PEHLRTNAVDCH 191

  Fly   173 VEFENYWQHLTKIFNILAL---VLIGFELLLSVISCRLCNSIRN 213
            .|.:|.:.....:..|.||   |::.||::.|::   ||..|||
Zfish   192 TEIKNLFTDKISLIGIAALVVAVIMIFEMIFSMV---LCCGIRN 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 47/230 (20%)
cd81aNP_571593.2 Tetraspanin 12..228 CDD:459767 47/230 (20%)

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