DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and zgc:113223

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001013569.1 Gene:zgc:113223 / 541424 ZFINID:ZDB-GENE-050320-127 Length:266 Species:Danio rerio


Alignment Length:255 Identity:61/255 - (23%)
Similarity:100/255 - (39%) Gaps:46/255 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SVKLIVYALDVLC---TLLALVLISFGIYVAVSYNLNEIGQL---TAYGYVGLGAAALLVVLWGY 64
            |.:.:.|.|.|.|   .:.:..||:.|||..::...:.:..|   .|...:.:|:....:...|.
Zfish     9 SFRAVKYTLFVCCYVFWVFSAGLIAVGIYAKIAKESDVVDTLMADPALLLIVVGSLMFTITFLGC 73

  Fly    65 LSAWRENVCCTVTFIIFLCLVIIAQF--AVVYLLIT---QEKTVASNLANALEATWEEELNSPGA 124
            ..|.|........|:..|.:|::.|.  ||:.||.:   ||:|  ..|.......:.::.:....
Zfish    74 FGALRNASLLLNMFVAILLVVLLLQVTAAVLGLLFSEKVQERT--EQLMMKAIVRYRDDQDLENV 136

  Fly   125 MSLYQNWFQCCGRGSPQDYIVN--------------ERLPPETCFRNHD---------------- 159
            :...|..|:|||..|..|:..|              ..:|...|.|..:                
Zfish   137 IDFVQKKFKCCGVDSYLDWSKNMYFNSSEHNPSLEAYGVPFSCCIRQKNETVFNSMCGYETQKMK 201

  Fly   160 KSKPENLIHT-GCRVEFENYWQHLTKIFNILALVLIGFEL-LLSVISCRLCNSIRNDARR 217
            ||....||:| ||..|...:.|....:...:.|||:..|: ::|:.|.:|| .|||..||
Zfish   202 KSLAGRLIYTSGCLDEMVWWGQQNLLLVGGMTLVLLCLEICMMSLASVQLC-QIRNVQRR 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 54/244 (22%)
zgc:113223NP_001013569.1 Tetraspanin 13..>148 CDD:459767 30/136 (22%)
penumbra_like_LEL 106..226 CDD:239411 26/121 (21%)

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