DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and Tspan14

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_666040.1 Gene:Tspan14 / 52588 MGIID:1196325 Length:270 Species:Mus musculus


Alignment Length:235 Identity:45/235 - (19%)
Similarity:90/235 - (38%) Gaps:47/235 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KLIVYALDVLCTLLALVLISFGIYV----AVSYNLNEIGQLTAYGYVGL----GAAALLVVLWGY 64
            |.::::.:::..|..:|.:..|::.    .|..:|.::.:|.....|.|    |.....:...|.
Mouse    16 KYLLFSYNIVFWLAGVVFLGVGLWAWSEKGVLSDLTKVTRLHGIDPVVLVLMVGVVMFTLGFAGC 80

  Fly    65 LSAWRENVCCTVTFIIFLCLVIIAQFAVVYLLITQEKTVASNLANALEA---TWEEELNSPGAMS 126
            :.|.|||:|....|...:.|:...:.||..|....:..|........|:   ::.::::....:.
Mouse    81 VGALRENICLLKFFCGAIVLIFFLELAVAVLAFLFQDWVRDRFREFFESNIKSYRDDIDLQNLID 145

  Fly   127 LYQNWFQCCGRGSPQDYIVN------------ER--LPPETCFRNHDKSKPENLIHTGC----RV 173
            ..|...||||...|:|:.:|            |:  :|...|.    ....:.:::|.|    |:
Mouse   146 SLQKANQCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCV----PDPAQKVVNTQCGYDVRI 206

  Fly   174 EFENYWQH--------------LTKIFNILALVLIGFELL 199
            :.::.|..              |.:...|:|.|.|...||
Mouse   207 QLKSKWDEFIFTKGCIQALEGWLPRNIYIVAGVFIAISLL 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 45/235 (19%)
Tspan14NP_666040.1 Tetraspanin 16..258 CDD:459767 45/235 (19%)
TM4SF9_like_LEL 113..233 CDD:239412 18/123 (15%)
Necessary and sufficient for interaction with ADAM10. /evidence=ECO:0000250|UniProtKB:Q8NG11 114..232 18/121 (15%)

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