DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and cd81

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_989271.1 Gene:cd81 / 394885 XenbaseID:XB-GENE-946220 Length:237 Species:Xenopus tropicalis


Alignment Length:247 Identity:49/247 - (19%)
Similarity:103/247 - (41%) Gaps:59/247 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TSSVKLIVYALDVLCTLLALVLISFGIYV---AVSYNL--NEIGQLTAYG--YVG------LGAA 55
            |..:|.:::..:.:..|...|::...:::   ..:.||  .:.....|.|  |:|      :||.
 Frog     7 TKCIKYLLFVFNFIFWLAGGVILGVALWLRHDPQTSNLLFQQFEDKHAPGTFYIGVYIIIAVGAV 71

  Fly    56 ALLVVLWGYLSAWRENVCCTVTFIIFLCLVIIAQFAV---VYLLITQEKTVASNL--------AN 109
            .:.|...|...|.:|:.|...||  |.||||:....|   ::..:.::: |:..:        .:
 Frog    72 MMFVGFLGCYGAIQESQCLLGTF--FACLVILFACEVAAGIWGFVNRDQ-VSKEMRLFYSEVYQH 133

  Fly   110 ALEATWEEELNSPGAMSLYQNWFQCCGRGSPQDYI---VNERLPPETCFRNHDKSKPENLIHTGC 171
            |...|.|::..:...:..:....||||..|.:.|:   :.:..|           |..|::.   
 Frog   134 ATTGTKEQQQKALPVLKAFHETLQCCGDASLKKYVTMSITDMCP-----------KRSNILE--- 184

  Fly   172 RVEFENYWQHLTKIFN-----------ILALVLIGFELLLSVISCRLCNSIR 212
            ::..|:..|.:..:|:           ::|:::| .|::.|::   ||..||
 Frog   185 QITIEDCHQKIDVLFSTKLYLVGIAAVVVAVIMI-IEMIFSMV---LCCGIR 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 45/239 (19%)
cd81NP_989271.1 Tetraspanin 10..229 CDD:459767 45/239 (19%)

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