DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and Tspan31

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001008379.1 Gene:Tspan31 / 362890 RGDID:1309876 Length:210 Species:Rattus norvegicus


Alignment Length:207 Identity:50/207 - (24%)
Similarity:84/207 - (40%) Gaps:29/207 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ALDVLCTLLALVLI---SFGIYVAVSYNLNEIGQLTAYGYVGLGAAALLVVLWGYLSAWRENVCC 74
            ||:|:..|:.|:||   ::|..:.|..:::.||     |.:.:|...||:.:.|.:.|...:...
  Rat    15 ALNVVYMLVGLLLIGVAAWGKGLGVVSSIHIIG-----GVIAVGVFLLLIAVAGLVGAVNHHQVL 74

  Fly    75 TVTFIIFLCLVIIAQFAVVYLLITQEKTVASNLANALEATWEEELNSPGAMSLYQNWFQCCGRGS 139
            ...::|.|.||.|.||.:....:...:...:::.|   |:|....||  .....:..|.|||   
  Rat    75 LFFYMIILGLVFIFQFGISCSCLAINRNTQADVIN---ASWWVLSNS--TRHELERSFDCCG--- 131

  Fly   140 PQDYIVNERLPPETCFRNHDKSKPENLIHT---GCRVEFENYWQHLTKIFNILALVLIGFELLLS 201
                     |...|....||.:....|..|   .|::..|.:.:|..|...||..|.:.|. ...
  Rat   132 ---------LFNLTTVHLHDDASCSALCKTRSSPCQMCGETFLKHSDKALKILGGVGLFFS-FTE 186

  Fly   202 VISCRLCNSIRN 213
            ::...|....||
  Rat   187 ILGVWLAMRFRN 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 48/201 (24%)
Tspan31NP_001008379.1 Tetraspanin 9..196 CDD:459767 48/203 (24%)

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